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[
热点
]
博士延得我,科研能力直往上蹿
偏振片
2026-02-05
刚刚
[
Gromacs
]
[已完结]
Amber 可以并行计算吗?
(2/648)
vallen
2011-07-13
2011-07-14 18:41:38
by
gromacs
[
Gromacs
]
关键词求助
(0/201)
licaiqin
2011-07-14
2011-07-14 11:38:01
by
licaiqin
[
Gromacs
]
GROMACS : 把两个*.top文件合并
(1/819)
dubo
2011-07-12
2011-07-12 17:19:09
by
ben_ladeng
[
Gromacs
]
[已完结]
关于小分子的结构问题
(6/1415)
ww5945
2011-07-08
2011-07-12 11:11:36
by
dubo
[
Gromacs
]
[已完结]
--
(0/225)
无色无味
2011-07-08
2011-07-08 14:37:08
by
无色无味
[
Gromacs
]
[已完结]
gromacs的脚本运行错误
(1/700)
zyj8119
2011-07-05
2011-07-07 10:08:26
by
dubo
[
Gromacs
]
【求助】这是我安装gromacs过程,但是出错阿,这个怎么办呢?谢谢
(11/3307)
xiao_2008
2011-01-20
2011-07-04 17:09:03
by
yongma2008
[
Gromacs
]
[已完结]
[关贴]
gromacs做空间分布函数
(0/273)
0419xuhao
2011-07-04
2011-07-04 10:20:10
by
0419xuhao
[
Gromacs
]
[已完结]
什么原因可能会引起MD时蛋白构象没有变化?
(5/1321)
xulinan
2011-06-20
2011-07-04 04:38:23
by
hhwinhuanghe
[
Gromacs
]
什么叫粒子插入法?
(模拟EPI+1)
(5/2228)
0419xuhao
2011-05-10
2011-07-01 16:35:46
by
huagai
[
Gromacs
]
【分享】VMD User's Guide
(评阅+3)
(5/650)
sinokang
2010-06-08
2011-07-01 12:36:07
by
lvchababy
[
Gromacs
]
用amber做DNA 的动力学模拟,能否说下你们曾经做过的最长的DNA?
(评阅+1)
(金币≥8)
(16/95)
200699wang
2011-05-30
2011-06-30 11:31:01
by
200699wang
[
Gromacs
]
[已完结]
磷酸根结构的获得及其MD问题
(0/980)
xulinan
2011-06-29
2011-06-29 16:31:24
by
xulinan
[
Gromacs
]
[已完结]
周期性的问题
(6/645)
memgr
2011-06-27
2011-06-29 15:34:27
by
memgr
[
Gromacs
]
[已完结]
tau_p应该是多少
(2/640)
memgr
2011-06-28
2011-06-29 15:32:55
by
memgr
[
Gromacs
]
[已完结]
有关solvateShell的问题
(0/383)
200699wang
2011-06-29
2011-06-29 11:11:35
by
200699wang
[
Gromacs
]
[已完结]
关于HyperChem构建DNA的问题
(金币≥1)
(1/42)
200699wang
2011-06-14
2011-06-29 11:01:58
by
200699wang
[
Gromacs
]
[已完结]
AMBER中qm/mm的问题
(评阅+1)
(5/1885)
量化新手
2011-06-24
2011-06-29 08:49:33
by
量化新手
[
Gromacs
]
gromacs空间分布函数的问题
(2/449)
sdu_x
2011-06-28
2011-06-28 17:15:17
by
sdu_x
[
Gromacs
]
[已完结]
gromacs 计算 binding free energy
(模拟EPI+1)
(金币≥10)
(4/147)
jackwangee
2011-05-15
2011-06-26 20:54:33
by
jackwangee
[
Gromacs
]
[已完结]
improper项的cosin和harmonic形式的相互转换
(0/413)
abin007
2011-06-23
2011-06-23 01:04:07
by
abin007
[
Gromacs
]
羧酸类物质的分子力场参数如何获得,哪种力场中包含
(0/255)
liuyusuc
2011-06-18
2011-06-18 13:04:19
by
liuyusuc
[
Gromacs
]
[已完结]
计算两个残基之间的最短距离
(0/1056)
shabeir
2011-06-17
2011-06-17 17:34:48
by
shabeir
[
Gromacs
]
[已完结]
[关贴]
mmpbsa出错
(0/255)
mengyan142
2011-06-14
2011-06-14 10:02:27
by
mengyan142
[
Gromacs
]
【求助】psf文件的生成
(
1
2
)
(19/2967)
redhaier
2010-06-04
2011-06-13 14:45:48
by
duotojh
[
Gromacs
]
[已完结]
混合溶剂盒子的构建?
(0/758)
zhulijuan001
2011-06-13
2011-06-13 09:35:40
by
zhulijuan001
[
Gromacs
]
Gromacs 能量最小化这一步用mdrun就出现Segmentation fault,怎么解决?
(2/1253)
zonycyle
2011-06-10
2011-06-13 08:32:47
by
zonycyle
[
Gromacs
]
用GROMACS如何进行NMA或ENM处理
(评阅+1)
(11/1254)
wtscrystal
2011-06-09
2011-06-12 20:38:45
by
ultraguy
[
Gromacs
]
[已完结]
配体受体MD
(评阅+1)
(3/895)
xulinan
2011-06-08
2011-06-09 11:49:28
by
xulinan
[
Gromacs
]
[已完结]
膜蛋白模拟genbox方法
(评阅+1)
(1/347)
奋斗1s
2011-06-07
2011-06-08 23:18:34
by
奋斗1s
[
Gromacs
]
【求助】求教关于gromacs中qmmethod与qmbasis的问题
(评阅+1)
(1/688)
come4c
2011-03-15
2011-06-07 21:59:25
by
sijifengsd
[
Gromacs
]
【求助】求教:gromacs中若有多个QM groups应该如何设置mdp文件?
(评阅+1)
(1/657)
come4c
2011-03-15
2011-06-07 21:53:52
by
sijifengsd
[
Gromacs
]
【求助】gromacs下对大分子体系QM/MM计算的问题
(评阅+1)
(1/1578)
come4c
2011-03-29
2011-06-07 21:46:58
by
sijifengsd
[
Gromacs
]
[已完结]
gromacs 中define 讨论 急急急
(0/1035)
sichuanemily
2011-06-07
2011-06-07 16:20:42
by
sichuanemily
[
Gromacs
]
分子动力学经典教材
(1/891)
goaliman
2011-06-07
2011-06-07 09:16:59
by
wzbhit
[
Gromacs
]
amber10聚类cluster
(4/1488)
夏天的鱼
2011-05-18
2011-06-07 08:48:26
by
夏天的鱼
[
Gromacs
]
amber10安装
(金币≥500)
(5/69)
夏天的鱼
2011-05-17
2011-06-06 09:18:54
by
夏天的鱼
[
Gromacs
]
[已完结]
请问gromacs里计算两个蛋白质的距离的命令是那一个
(4/1174)
20071130055
2011-05-18
2011-06-05 22:53:06
by
dubo
[
Gromacs
]
[已完结]
gromacs mdrun时水分子中的原子有问题
(2/1823)
xiaoyingw
2011-04-27
2011-06-05 22:49:38
by
dubo
[
Gromacs
]
[已完结]
请帮我做下酶的MD
(评阅-19)
(3/840)
游子8921
2011-06-01
2011-06-05 22:47:35
by
dubo
[
Gromacs
]
[已完结]
gromacs使用SMD产生force-time数据如何作图
(评阅+1)
(2/1255)
fanc232
2011-06-01
2011-06-05 22:45:59
by
dubo
[
Gromacs
]
GBSA能量分解出错
(评阅+1)
(1/432)
sinokang
2011-06-03
2011-06-05 22:28:38
by
dubo
[
Gromacs
]
[已完结]
mmpbsa 出错
(3/787)
mengyan142
2011-05-27
2011-06-05 15:38:47
by
sinokang
[
Gromacs
]
[已完结]
膜蛋白模拟genbox出错:cannot allocate memory
(评阅+1)
(1/932)
奋斗1s
2011-06-01
2011-06-01 23:06:51
by
奋斗1s
[
Gromacs
]
大家看看这张图是怎么组装的??先谢谢了
(1/537)
nufang19a
2011-05-31
2011-06-01 08:35:58
by
wl1258
[
Gromacs
]
[已完结]
gromacs 蛋白优化不成功应该怎样做?
(0/279)
sichuanemily
2011-05-31
2011-05-31 19:34:38
by
sichuanemily
[
Gromacs
]
【求助】有点难度 Too many LINCS warnings
(2/2442)
dndxwoaini
2011-03-11
2011-05-30 11:36:32
by
ldf831206
[
Gromacs
]
【求助】跑完MD后,一般都要分析什么东西?
(3/1290)
voleyes
2010-06-24
2011-05-27 19:20:39
by
lvchababy
[
Gromacs
]
[已完结]
amber 动力学模拟中中DNA太长有什么影响[color=Red]?????[/color]
(0/241)
200699wang
2011-05-27
2011-05-27 13:14:16
by
200699wang
[
Gromacs
]
【求助】antechamber中遇到的问题
(
1
2
)
(11/1017)
tingjun
2010-06-01
2011-05-27 03:44:39
by
fjeld
[
Gromacs
]
[已完结]
能量优化时出错
(评阅+1)
(2/1011)
Jfreda
2011-05-14
2011-05-25 08:56:23
by
冯慧敏
[
Gromacs
]
[已完结]
怎样使用Amber
(1/634)
goaliman
2011-05-18
2011-05-24 08:54:41
by
200699wang
[
Gromacs
]
[已完结]
在某一点的自由能
(1/399)
shang_shan
2011-05-23
2011-05-24 08:34:29
by
被风掠过
[
Gromacs
]
[关贴]
概率分布“漂移”了怎么办?
(1/823)
明月照清渠
2011-05-23
2011-05-23 20:02:29
by
bamboosity
[
Gromacs
]
[已完结]
[关贴]
从固定MD中提取不同构象跑不固定MD?
(2/542)
gxsulong
2011-05-23
2011-05-23 15:36:41
by
gxsulong
[
Gromacs
]
轨迹文件mdcrd过大,VMD总是出错,有什么解决办法?
(3/1822)
xmgign
2011-05-18
2011-05-23 12:20:49
by
liqingwen
[
Gromacs
]
[已完结]
Gromacs做steep之后做cg出错
(评阅+1)
(5/1303)
奋斗1s
2011-05-17
2011-05-22 23:44:46
by
奋斗1s
[
Gromacs
]
[已完结]
请问用g_dist计算两蛋白间距离
(0/333)
20071130055
2011-05-22
2011-05-22 17:51:37
by
20071130055
[
Gromacs
]
vmd中怎么算某段蛋白的溶液可及化表面积随模拟时间的变化呢?
(1/597)
gjj09
2011-05-21
2011-05-22 13:41:31
by
gjj09
[
Gromacs
]
水分子在纳米管中,求其氢键与管轴的夹角
(2/824)
dndxwoaini
2011-05-05
2011-05-22 10:11:57
by
whl2dxl
[
Gromacs
]
[已完结]
请问如何比较碳骨架组的Rg?
(0/463)
20071130055
2011-05-21
2011-05-21 23:47:42
by
20071130055
[
Gromacs
]
[已完结]
请问回旋半径Rg具体指什么?
(0/2717)
20071130055
2011-05-21
2011-05-21 23:44:02
by
20071130055
[
Gromacs
]
[已完结]
g_enery中参数的意义
(2/488)
20071130055
2011-05-20
2011-05-21 12:01:24
by
20071130055
[
Gromacs
]
[已完结]
g_gyrate中参数的意义
(3/1056)
20071130055
2011-05-19
2011-05-20 16:55:28
by
gxsulong
[
Gromacs
]
[已完结]
peek_ewald_inpcrd: SHOULD NOT BE HERE是怎么回事?
(金币≥5)
(0/23)
200699wang
2011-05-16
2011-05-16 09:17:25
by
200699wang
[
Gromacs
]
[已完结]
[关贴]
NAMD的能量最小化
(0/960)
aquariusy
2011-05-15
2011-05-15 08:42:23
by
aquariusy
[
Gromacs
]
[已完结]
三氟乙酸的参数。
(2/523)
superdirac
2011-05-13
2011-05-13 16:41:22
by
superdirac
[
Gromacs
]
[已完结]
SMD中恒速牵拉和恒力牵拉有什么区别和联系?
(2/969)
200699wang
2011-05-05
2011-05-12 14:37:37
by
200699wang
[
Gromacs
]
amber中如何加水和乙醇混合溶剂
(0/629)
gnli
2011-05-12
2011-05-12 11:02:32
by
gnli
[
Gromacs
]
[已完结]
[关贴]
Amber 力场下的namd轨迹文件能转化为amber轨迹文件吗?
(2/685)
200699wang
2011-05-04
2011-05-11 22:35:04
by
200699wang
[
Gromacs
]
gromacs 隐式溶剂
(0/1386)
xiaoyingw
2011-05-11
2011-05-11 22:05:11
by
xiaoyingw
[
Gromacs
]
[已完结]
请教高手讲解Amber安装过程
(模拟EPI+1)
(1/500)
gnli
2011-05-09
2011-05-09 21:10:10
by
ben_ladeng
[
Gromacs
]
[已完结]
谁能提供个Amber的安装程序?
(1/524)
gnli
2011-05-06
2011-05-07 07:02:53
by
fakeyousb
[
Gromacs
]
[已完结]
amber分子模型模型的构建
(0/560)
xiaowuxian
2011-05-06
2011-05-06 10:15:43
by
xiaowuxian
[
Gromacs
]
[已完结]
SMD相关问题,好心人哪,你到哪里去了?
(0/266)
200699wang
2011-05-05
2011-05-05 20:15:23
by
200699wang
[
Gromacs
]
【求助】关于gromacs安装,mpi安装的时候,总是no timer found,是什么原因?
(评阅+1)
(2/417)
wdali
2010-12-07
2011-05-05 14:55:50
by
奋斗1s
[
Gromacs
]
【讨论】如何指定一个pull 力,但这个力是非谐振变力
(3/381)
dndxwoaini
2011-03-25
2011-05-05 09:57:16
by
dndxwoaini
[
Gromacs
]
[已完结]
gromacs运行出错
(评阅+1)
(3/1409)
奋斗1s
2011-05-04
2011-05-05 09:12:14
by
奋斗1s
[
Gromacs
]
[已完结]
【求助】amber输出文件分析,后缀名不同分别代表什么
(评阅+1)
(0/867)
量化新手
2011-05-04
2011-05-04 20:12:11
by
量化新手
[
Gromacs
]
[已完结]
[求助]AMBER数据分析问题
(9/1356)
量化新手
2011-04-29
2011-05-03 10:19:03
by
量化新手
[
Gromacs
]
[已完结]
AMBER的并行运算
(1/681)
超人与小木虫
2011-04-28
2011-04-28 22:11:51
by
skee2008
[
Gromacs
]
[已完结]
gromacs中的一些问题
(1/473)
Jfreda
2011-04-28
2011-04-28 20:10:49
by
Jfreda
[
Gromacs
]
[已完结]
哪位有Fe3O4的Top文件
(0/265)
smallhawk
2011-04-28
2011-04-28 11:28:22
by
smallhawk
[
Gromacs
]
[已完结]
NAMD的SMD中如何加螺旋力
(1/413)
sjnyongle
2011-04-26
2011-04-27 20:50:34
by
wally8962
[
Gromacs
]
[已完结]
我的蛋白质中有个氨基酸被我人为的乙酰化了,请问这样的蛋白质可以通过Gromacs跑MD吗?
(0/477)
cy0010
2011-04-26
2011-04-26 17:10:46
by
cy0010
[
Gromacs
]
[已完结]
NAMD中怎样求SMD分子的质心坐标
(
1
2
)
(金币≥80)
(12/63)
200699wang
2011-04-20
2011-04-26 14:57:41
by
200699wang
[
Gromacs
]
groma csdistance restraint
(金币≥16)
(0/17)
猪猪的宝贝
2011-04-26
2011-04-26 10:50:08
by
猪猪的宝贝
[
Gromacs
]
成键能束缚前1/2?
(0/199)
kjl3283
2011-04-25
2011-04-25 22:53:34
by
kjl3283
[
Gromacs
]
[已完结]
在amber中怎么计算一组原子的中心与另一组原子中心的距离的变化
(0/405)
voleyes
2011-04-25
2011-04-25 18:53:08
by
voleyes
[
Gromacs
]
[已完结]
gromacs mdrun出错
(0/394)
xiaoyingw
2011-04-25
2011-04-25 15:34:54
by
xiaoyingw
[
Gromacs
]
[已完结]
参数设置
(2/327)
Jfreda
2011-04-24
2011-04-25 09:27:29
by
御剑江湖
[
Gromacs
]
[已完结]
mdp参数设置
(评阅+1)
(3/827)
Jfreda
2011-04-20
2011-04-23 00:51:02
by
whl2dxl
[
Gromacs
]
【求助】能加多少水
(1/286)
memgr
2011-04-07
2011-04-22 00:24:07
by
whl2dxl
[
Gromacs
]
[已完结]
均方末端距
(1/908)
memgr
2011-04-21
2011-04-21 21:58:01
by
zyj8119
[
Gromacs
]
[已完结]
紧急求助!amber加各向不同厚度溶剂
(0/154)
xd200620940
2011-04-21
2011-04-21 18:55:20
by
xd200620940
[
Gromacs
]
[已完结]
继续求助gromacs安装-第二期,fftw-3.1.2
(0/399)
奋斗1s
2011-04-21
2011-04-21 13:22:43
by
奋斗1s
[
Gromacs
]
[已完结]
gromacs安装第一期:lam-7.1.3 结果分析
(0/430)
奋斗1s
2011-04-21
2011-04-21 11:29:34
by
奋斗1s
[
Gromacs
]
【求助】什么是可及表面积?
(2/458)
ruthxu
2011-04-12
2011-04-21 11:13:03
by
ts2009
[
Gromacs
]
【求助】SMD方向问题
(7/1197)
wangyibo20
2009-05-31
2011-04-20 20:00:41
by
200699wang
[
Gromacs
]
为什么能量最小化时出现Unit 10 Error on OPEN: refc 的错误提示
(2/1923)
xiaowuxian
2011-04-19
2011-04-20 17:40:18
by
xiaowuxian
2848
25/29
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