| ²é¿´: 2175 | »Ø¸´: 6 | ||
wyangdaoľ³æ (ÕýʽдÊÖ)
|
[ÇóÖú]
ÓÃgromacsÈí¼þ×öÖð½¥ÉýεÄʱºò³öÏÖÕâ¸öÎÊÌ⣬ÇóÈçºÎ½â¾ö ÒÑÓÐ1È˲ÎÓë
|
|
ÕâÊÇÎÒµÄmd.mdpÎļþµÄÒ»²¿·Ö¡£ Tcoupl = berendsen tau_t = 0.1 0.1 tc_grps = 14A sol ref_t = 300 300 annealing = single annealing_npoints = 4 annealing_time = 0 5 10 30 annealing_temp = 293 373 373 277 ´íÎóÌáʾÊÇ£º Program grompp_mpi, VERSION 4.0.4 Source code file: readir.c, line: 1508 Fatal error: Not enough annealing values: 1 (for 2 groups) |
» ²ÂÄãϲ»¶
»¯Ñ§¹¤³Ì321·ÖÇóµ÷¼Á
ÒѾÓÐ11È˻ظ´
²ÄÁÏר˶326Çóµ÷¼Á
ÒѾÓÐ5È˻ظ´
¶«ÄÏ´óѧ364Çóµ÷¼Á
ÒѾÓÐ5È˻ظ´
¹ú×Ô¿ÆÃæÉÏ»ù½ð×ÖÌå
ÒѾÓÐ7È˻ظ´
ҩѧ383 Çóµ÷¼Á
ÒѾÓÐ4È˻ظ´
286Çóµ÷¼Á
ÒѾÓÐ5È˻ظ´
085601Çóµ÷¼Á
ÒѾÓÐ3È˻ظ´
302Çóµ÷¼Á
ÒѾÓÐ5È˻ظ´
¿¼Ñл¯Ñ§Ñ§Ë¶µ÷¼Á£¬Ò»Ö¾Ô¸985
ÒѾÓÐ5È˻ظ´
328Çóµ÷¼Á£¬Ó¢ÓïÁù¼¶551£¬ÓпÆÑоÀú
ÒѾÓÐ4È˻ظ´
» ±¾Ö÷ÌâÏà¹Ø¼ÛÖµÌùÍÆ¼ö£¬¶ÔÄúͬÑùÓаïÖú:
gromacsÖеÄmdpÎļþµÄ±àÒëÎÊÌâ
ÒѾÓÐ6È˻ظ´
¹ØÓÚMSºÍGROMACSÎļþת»»µÄÎÊÌâ
ÒѾÓÐ8È˻ظ´
gromacsÇâ¼ü·ÖÎö¹¤¾ß£¬g_hbondÊä³ö½á¹û½âÎö£¿
ÒѾÓÐ11È˻ظ´
ÈçºÎ½«amberµÄ¹ì¼£Îļþmdcrd¸ñʽת»»³ÉgromacsµÄ¹ì¼£Îļþ¸ñʽ trrÄØ
ÒѾÓÐ5È˻ظ´
Çë½Ìgromacsµ°°×ÓëС·Ö×ÓÏ໥×÷Ó÷ÖÎö
ÒѾÓÐ12È˻ظ´
autodockÓëgromacsÔÚWindowsϵݲװ
ÒѾÓÐ10È˻ظ´
gromacs Ä£ÄâʱÈçºÎ¹Ì¶¨½ðÊôÀë×ÓµÄÎÊÌâ
ÒѾÓÐ10È˻ظ´
gromacs Ä£Äâ³öÏÖÖÜÆÚÐÔÎÊÌâ
ÒѾÓÐ6È˻ظ´
ÔõôÓÃgromacsÄ£Äâ»ìºÏÈܼÁ£¿¹òÇó´óÅ£Ö¸µ¼¡£¡£¡£
ÒѾÓÐ15È˻ظ´
gromacs±àÒë°²×°
ÒѾÓÐ11È˻ظ´
Gromacs´ÖÁ£»¯Á¦³¡£¨×Ô¼ºÐ´£©
ÒѾÓÐ11È˻ظ´
Àë×ÓÒºÌåÄ£Ä⣺ÈçºÎ´Ó±ðµÄÈí¼þÒÆÖ²Á¦³¡µ½Gromacs£¨itpÎļþµÄº¬ÒåÒÔ¼°ÈçºÎдitpÎļþ£©
ÒѾÓÐ4È˻ظ´
gromacs×Ô¼ºÌí¼ÓresidueÓöµ½µÄÎÊÌâ
ÒѾÓÐ6È˻ظ´
gromacsË®ÖеÄÈܾúø°¸Àý,Äijö´íÁË?
ÒѾÓÐ7È˻ظ´
ÈçºÎÓÃMSµÄÄÉÃ×¹Ü×ø±êתµ½gromacs¿Éʶ±ðµÄÎļþ
ÒѾÓÐ7È˻ظ´
ÇóGromacsÖÐÎÄÊÖ²á
ÒѾÓÐ4È˻ظ´
Çë½ÌGROMACS°²×°
ÒѾÓÐ8È˻ظ´
[ÐÂÊÖÇó½Ì]°²×°Gromacsºó£¬²é¿´pdb2gmxÃüÁÏÔʾÎÞ´ËÃüÁî
ÒѾÓÐ9È˻ظ´
¡¾×ªÌû¡¿GROMACS·ÖÎö³ÌÐòÌÖÂÛ£¬ÔÚgromacsÖÐÌí¼ÓAmberÁ¦³¡
ÒѾÓÐ8È˻ظ´
¡¾ÇóÖú¡¿ÕâÊÇÎÒ°²×°gromacs¹ý³Ì£¬µ«Êdzö´í°¢£¬Õâ¸öÔõô°ìÄØ£¿Ð»Ð»
ÒѾÓÐ11È˻ظ´
¡¾ÇóÖú¡¿ÖؽðÇóÖú£ºgromacsÖÐg_rmsÃüÁîÖÐÔõÑùÓ¦ÓÃindex.ndxÎļþ
ÒѾÓÐ8È˻ظ´
¡¾Ô´´¡¿ÔÚgromacsµÄgroÖвåÈëС·Ö×Ó
ÒѾÓÐ12È˻ظ´
¡¾ÇóÖú¡¿ÇóÒ»¸ögromacsµÄÖÐÎĽ̳̣¬°üÀ¨°²×°µÄ²¿·Ö£¬Ð¡µÜÐÂÊÖ£¬´ÓÁãѧÆð
ÒѾÓÐ8È˻ظ´
¡¾ÇóÖú¡¿GromacsºÍNAMD±ÈAmber¿ìºÜ¶àÂð£¿ÈçºÎÑ¡Ôñ£¿
ÒѾÓÐ7È˻ظ´
¡¾ÇóÖú¡¿NAMDºÍGromacsÄĸö¼òµ¥£¿
ÒѾÓÐ5È˻ظ´
franksha
½ð³æ (ÕýʽдÊÖ)
- Ó¦Öú: 0 (Ó×¶ùÔ°)
- ½ð±Ò: 1472.1
- É¢½ð: 500
- ºì»¨: 1
- Ìû×Ó: 486
- ÔÚÏß: 384.5Сʱ
- ³æºÅ: 494131
- ×¢²á: 2008-01-11
- ÐÔ±ð: GG
- רҵ: Äý¾Û̬ÎïÐÔI:½á¹¹¡¢Á¦Ñ§ºÍ
¡¾´ð°¸¡¿Ó¦Öú»ØÌû
| Á½¸ö×é,4¸öÍË»ðµã,ΪʲôֻÓÐÒ»×éζÈÍË»ð,µÚ¶þ¸ö×éÓ¦¸ÃÒ²Ò»ÑùÉèÖÃÍË»ðʱ¼äºÍζȰ¡ |
2Â¥2015-07-03 15:26:34
wyangdao
ľ³æ (ÕýʽдÊÖ)
- Ó¦Öú: 3 (Ó×¶ùÔ°)
- ½ð±Ò: 2660
- É¢½ð: 188
- ºì»¨: 4
- Ìû×Ó: 305
- ÔÚÏß: 274.7Сʱ
- ³æºÅ: 2715312
- ×¢²á: 2013-10-11
- ÐÔ±ð: GG
- רҵ: ÉúÎï´ó·Ö×ӽṹÓ빦ÄÜ
|
; Temperature coupling is on tcoupl = Berendsen ; modified Berendsen thermostat tc-grps = Protein Non-Protein ; two coupling groups - more accurate tau_t = 0.1 0.1 ; time constant, in ps ref_t = 300 300 ; reference temperature, one for each group, in K annealing = single single annealing©\npoints = 4 4 annealing©\time = 0 10 20 55 0 10 20 55 annealing©\temp = 300 313 323 293 300 313 323 293 ³öÏÖÕâÑùµÄ´íÎó Fatal error: Found 0 annealing-npoints values for 2 groups |
3Â¥2015-07-03 20:08:44
wyangdao
ľ³æ (ÕýʽдÊÖ)
- Ó¦Öú: 3 (Ó×¶ùÔ°)
- ½ð±Ò: 2660
- É¢½ð: 188
- ºì»¨: 4
- Ìû×Ó: 305
- ÔÚÏß: 274.7Сʱ
- ³æºÅ: 2715312
- ×¢²á: 2013-10-11
- ÐÔ±ð: GG
- רҵ: ÉúÎï´ó·Ö×ӽṹÓ빦ÄÜ
4Â¥2015-07-03 20:10:21
ÇàÇà°×°×123
гæ (СÓÐÃûÆø)
- Ó¦Öú: 0 (Ó×¶ùÔ°)
- ½ð±Ò: 174.6
- Ìû×Ó: 123
- ÔÚÏß: 28.3Сʱ
- ³æºÅ: 7408360
- ×¢²á: 2017-11-01
- רҵ: ¹¤³ÌÈÈÎïÀíÏà¹Ø½»²æÁìÓò
5Â¥2018-01-30 16:24:28
wyangdao
ľ³æ (ÕýʽдÊÖ)
- Ó¦Öú: 3 (Ó×¶ùÔ°)
- ½ð±Ò: 2660
- É¢½ð: 188
- ºì»¨: 4
- Ìû×Ó: 305
- ÔÚÏß: 274.7Сʱ
- ³æºÅ: 2715312
- ×¢²á: 2013-10-11
- ÐÔ±ð: GG
- רҵ: ÉúÎï´ó·Ö×ӽṹÓ빦ÄÜ
6Â¥2018-01-31 19:10:56
²»»á·ÉµÄÇàÄñ
гæ (³õÈëÎÄ̳)
- Ó¦Öú: 0 (Ó×¶ùÔ°)
- ½ð±Ò: 5
- Ìû×Ó: 4
- ÔÚÏß: 10.2Сʱ
- ³æºÅ: 5999482
- ×¢²á: 2017-03-15
- רҵ: Ò©¼Áѧ
7Â¥2018-05-30 11:15:31













»Ø¸´´ËÂ¥