24小时热门版块排行榜    

查看: 4049  |  回复: 4
当前只显示满足指定条件的回帖,点击这里查看本话题的所有回帖

chendong0625

银虫 (小有名气)

[求助] gromacs grompp的时候出现如下错误

WARNING 1 [file he.top, line 25863]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 2 [file forcefield.itp, line 1]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 3 [file forcefield.itp, line 2]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 4 [file forcefield.itp, line 3]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 5 [file forcefield.itp, line 4]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 6 [file forcefield.itp, line 5]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 7 [file forcefield.itp, line 6]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 8 [file forcefield.itp, line 7]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 9 [file forcefield.itp, line 8]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 10 [file forcefield.itp, line 9]:
  Too few parameters on line (source file toppush.c, line 1501)

WARNING 11 [file forcefield.itp, line 10]:
  Too few parameters on line (source file toppush.c, line 1501)

-------------------------------------------------------
Program grompp, VERSION 4.5.5
Source code file: topio.c, line: 656

Fatal error:
Syntax error - File forcefield.itp, line 15
Last line read:
'[ defaults ]'
Invalid order for directive defaults
For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors
-------------------------------------------------------

前面pdb和top文件都建好没问题,加好盒子和溶剂以后,运行grompp能量最小化的时候,出现了以上错误。各位朋友帮忙分析分析,是什么原因?
回复此楼

» 猜你喜欢

» 本主题相关价值贴推荐,对您同样有帮助:

让我们面对现实,让我们忠于理想。
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

蒙延娟

金虫 (初入文坛)

应该是你的动力学参数文件没设置好,可以参考一下别人的mdp文件
let life be beautiful like summer flower !
3楼2012-03-02 09:31:07
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖
查看全部 5 个回答

chendong0625

银虫 (小有名气)

懂相关知识的人希望能不吝赐教
让我们面对现实,让我们忠于理想。
2楼2012-03-02 09:15:01
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

微米阳光

铜虫 (初入文坛)

引用回帖:
2楼: Originally posted by chendong0625 at 2012-03-02 09:15:01
懂相关知识的人希望能不吝赐教

请问您的问题后来怎么解决的吗?我也遇到同样问题,却不知道该怎么做。谢谢!
4楼2017-08-01 13:51:21
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

yyy199609

铁虫 (初入文坛)

请问楼主问题解决了吗
5楼2019-04-12 10:24:11
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖
最具人气热帖推荐 [查看全部] 作者 回/看 最后发表
[论文投稿] 售SCI-T0P文章,我:8O.5.5.1.O.54,科目齐全,可+急 +4 uKOSCocCb6Fm 2026-11-12 7/350 2026-11-15 03:10 by xSrQNSSjcgoX
[硕博家园] 售SCI文章,我:8O.5.5.1O.54,科目全,可十急 +3 uKOSCocCb6Fm 2026-11-12 9/450 2026-11-15 02:04 by xSrQNSSjcgoX
[考博] 售SCI一区文章,我:8.O.55.1.O.54,科目齐全,可伽急 +4 G2rhSvqvhNzl 2026-11-10 6/300 2026-11-15 00:24 by Equinoxhua
[基金申请] 售SCI-T0P文章,我:8O.5.5.1.O.54,科目齐全,可+急 +3 XJXMuRjD7cK7 2026-11-13 3/150 2026-11-13 23:37 by 6PrO1XyZ5URF
[硕博家园] 售SCI一区T0P文章,我:8O.55.1.O.54,科目全,可伽急 +5 C6CRn66RYYXS 2026-11-10 9/450 2026-11-13 11:02 by Equinoxhua
[考博] 27博士申请 +5 白白白ly 2026-11-09 5/250 2026-11-13 05:01 by wlf1982
[教师之家] 售SCI-T0P文章,我:8O.5.5.1.O.54,科目齐全,可+急 +6 C6CRn66RYYXS 2026-11-10 6/300 2026-11-13 04:21 by Equinoxhua
[论文投稿] 售SCI一区T0P文章,我:8.O.55.1.O54,科目全,可伽急 +3 TgvkbZZl9tqB 2026-11-11 4/200 2026-11-12 12:51 by ECLTXnJnRSXf
[公派出国] 售SCI一区文章,我:8O5.5.1.O5.4,科目全,可伽急 +3 TgvkbZZl9tqB 2026-11-11 4/200 2026-11-12 12:48 by ECLTXnJnRSXf
[硕博家园] 售SCI一区文章,我:8.O.551.O.5.4,科目全,可伽急 +3 TgvkbZZl9tqB 2026-11-11 4/200 2026-11-12 12:28 by ECLTXnJnRSXf
[考博] 售SCI一区T0P文章,我:8.O55.1.O.54,科目全,可十急 +3 Z7qfCsdIiD1T 2026-11-10 5/250 2026-11-12 11:25 by HajghKOMynmz
[硕博家园] 售SCI一区T0P文章,我:8O.55.1.O.5.4,科目齐全,可+急 +4 Z7qfCsdIiD1T 2026-11-10 6/300 2026-11-12 11:22 by HajghKOMynmz
[基金申请] 售SCI文章,我:8O5.5.1.O.54,科目齐全,可+急 +5 czAiolzR0IJC 2026-11-10 9/450 2026-11-12 11:11 by HajghKOMynmz
[硕博家园] 售SCI文章,我:8O.5.5.1O.54,科目全,可十急 +4 G2rhSvqvhNzl 2026-11-10 6/300 2026-11-12 10:49 by HajghKOMynmz
[公派出国] 售SCI-T0P文章,我:8O.5.5.1.O.54,科目齐全,可+急 +5 YHiw1gou1Eda 2026-11-10 6/300 2026-11-12 10:14 by HajghKOMynmz
[教师之家] 售SCI一区T0P文章,我:8.O.55.1.O54,科目全,可伽急 +7 FChKX8meu1ds 2026-11-09 12/600 2026-11-12 09:43 by HajghKOMynmz
[基金申请] 售SCI一区文章,我:8.O.551.O.5.4,科目全,可伽急 +3 TgvkbZZl9tqB 2026-11-11 5/250 2026-11-12 08:15 by HajghKOMynmz
[考研] 售SCI一区文章,我:8.O.55.1.O.54,科目齐全,可伽急 +6 FChKX8meu1ds 2026-11-09 9/450 2026-11-12 05:19 by 9fOTqj074tIg
[教师之家] 售SCI一区文章,我:8.O.55.1.O.54,科目齐全,可伽急 +6 0TEMgxdT1eIw 2026-11-09 8/400 2026-11-12 05:00 by 9fOTqj074tIg
[考研] 售一区SCI文章T0P,我:8O.551.O54,科目全,可十急 +3 Z7qfCsdIiD1T 2026-11-10 4/200 2026-11-12 02:23 by 9fOTqj074tIg
信息提示
请填处理意见