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板桥霜木虫 (正式写手)
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[求助]
help---------openmpi 已有2人参与
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hello every, I've got some problems when I try to compile hello_c.c, one sample of openmpi1.8 examples, the messages are here: ./Makefile hello_c.c ./Makefile: line 27: CC: command not found ./Makefile: line 28: CXX: command not found ./Makefile: line 29: CCC: command not found ./Makefile: line 30: FC: command not found ./Makefile: line 31: JAVAC: command not found ./Makefile: line 32: SHMEMCC: command not found ./Makefile: line 33: SHMEMFC: command not found ./Makefile: line 40: CFLAGS: command not found ./Makefile: line 41: CXXFLAGS: command not found ./Makefile: line 42: CCFLAGS: command not found ./Makefile: line 43: FCFLAGS: command not found ./Makefile: line 47: EXAMPLES: command not found ./Makefile: line 70: all:: command not found ./Makefile: line 71: syntax error near unexpected token `then' ./Makefile: line 71: ` @ if which ompi_info >/dev/null 2>&1 ; then \' [root@lab-host examples]# which mpicc /home/han/program/openmpi/bin/mpicc I have add the path of mpicc, mpic++ and mifort to PATH, what should I do? Thanks alot |
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板桥霜
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2楼2014-08-28 09:40:12
liliangfang
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3楼2014-08-29 07:54:58
板桥霜
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I've tried using root, still wrong. and it's not about gcc, cause $ rpm -qa |grep gcc gcc-c++-4.4.6-3.el6.i686 gcc-gfortran-4.4.6-3.el6.i686 gcc-4.4.6-3.el6.i686 libgcc-4.4.6-3.el6.i686 The program was complied with icc, ifort thanks anyway~ ================================================== The work was carried out in a cluster composed of 1 server(lib-host), 2 nodes(lib-p1 and lib-p2). NFS, NIS, RSH, and ip ruls were set up. now, when I login the server as user (username han): [han@lab-host ~]$ which mpicc ~/program/openmpi/bin/mpicc [han@lab-host ~]$ which mpic++ ~/program/openmpi/bin/mpic++ [han@lab-host ~]$ which mpifort ~/program/openmpi/bin/mpifort [han@lab-host ~]$ which mpiexec ~/program/openmpi/bin/mpiexec [han@lab-host ~]$ which mpirun ~/program/openmpi/bin/mpirun =================================== I can locate the file here: [han@lab-host ~]$ locate libsvml.so /home/han/program/icc/composer_xe_2013_sp1.2.144/compiler/lib/ia32/libsvml.so =================================== but when I log in the node , sth was wrong: the program of "which " was correct [han@lab-host ~]$ locate libsvml.so /home/han/program/icc/composer_xe_2013_sp1.2.144/compiler/lib/ia32/libsvml.so ====================================== when I use the program of "locate" [han@lab-p1 ~]$ locate libsvml.so [han@lab-p1 ~]$ nothing was located the enveriment variables of PATH, LD_LIBARARY_PATH was added. what' wrong with my cluster..... thank you |
4楼2014-08-29 09:02:54
liqizuiyang
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It seems that the corresponding environmental variables are not correctly set. You may set them by "export CC=icc" "export CXX=icpc" etc. . Anyway, there is no need to bother running the examples distributed along with the source code. Just try the testsuite by "make test". If it passes all the tests, then the compilation is successful. It happened to me that openmpi with version number > 1.6.4 did not work well. On the contrary, the 1.6.4 version was proved to very robust. In fact, all the computers in our group employ this version. |
5楼2014-08-29 09:24:41
板桥霜
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6楼2014-08-30 10:40:51
感谢参与，应助指数 +1
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7楼2014-08-30 10:58:39
板桥霜
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[han@lab-host examples]$ echo $PATH /home/han/program/icc/bin:/home/han/program/openmpi/bin:/home/han/program/openmpi/bin:/home/han/program/icc/bin:/usr/lib/qt-3.3/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/han/bin [han@lab-host examples]$ echo $LD_LIBRARY_PATH /home/han/program/icc/lib/ia32:/home/han/program/icc/composer_xe_2013_sp1.2.144/compiler/lib/ia32:/home/han/program/openmpi/lib:/home/han/program/icc/lib/ia32:/home/han/program/openmpi/lib: These are my environmental variables............. |
8楼2014-08-30 11:21:45
板桥霜
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environmental variables on nodes lab-p1 and lab-p2 are: [han@lab-p2 ~]$ echo $PATH /home/han/program/icc/bin:/home/han/program/openmpi/bin:/usr/lib/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/han/bin [han@lab-p2 ~]$ echo $LD_LIBRARY_PATH /home/han/program/icc/lib/ia32:/home/han/program/icc/composer_xe_2013_sp1.2.144/compiler/lib/ia32:/home/han/program/openmpi/lib: |
9楼2014-08-30 11:46:54
liqizuiyang
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10楼2014-08-30 14:19:03
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