24小时热门版块排行榜    

查看: 964  |  回复: 1

pangrui1985

铜虫 (小有名气)

[求助] 并行版的SIESTA不能运行 已有1人参与

编译能通过,但运行老是报错
mpirun noticed that process rank 34 with PID 24030 on node fn043 exited on signal 11
连tests里面的si64都报错,所以我觉得不是简单的内存问题。
下面是我的make文件,请高手指教一下出了什么问题?是ldau版的
.SUFFIXES:
.SUFFIXES: .f .F .o .a .f90 .F90

SIESTA_ARCH=x86_64-unknown-linux-gnu--Intel

FPP=
FPP_OUTPUT=
FC=/home-fn/compiler/mpi/openmpi-1.4.4-pgi/bin/mpif90
RANLIB=ranlib

SYS=nag

SP_KIND=4
DP_KIND=8
KINDS=$(SP_KIND) $(DP_KIND)

FFLAGS=-g -assume byterecl -heap-arrays 64
FPPFLAGS= -DMPI -DFC_HAVE_FLUSH -DFC_HAVE_ABORT
LDFLAGS=

ARFLAGS_EXTRA=

FCFLAGS_fixed_f=
FCFLAGS_free_f90=
FPPFLAGS_fixed_F=
FPPFLAGS_free_F90=

BLAS_LIBS=-L/home-fn/compiler/intel/mk/lib/intel64 -lmkl_scalapack_ilp64 -lmkl_cdft_core -lmkl_intel_ilp64 -l
mkl_core -lmkl_sequential -lmkl_blacs_intelmpi_ilp64 -lpthread -lm
LAPACK_LIBS=-L/home-fn/compiler/intel/mk/lib/intel64 -lmkl_scalapack_ilp64 -lmkl_cdft_core -lmkl_intel_ilp64
-lmkl_core -lmkl_sequential -lmkl_blacs_intelmpi_ilp64 -lpthread -lm
BLACS_LIBS=-L/home-fn/compiler/intel/mkl/lib/intel64 -lmkl_blacs_intelmpi_ilp64 -lmkl_intel_ilp64 -lmkl_core
-lmkl_sequential -lpthread -lm
SCALAPACK_LIBS=-L/home-fn/compiler/intel/mkl/lib/intel64 -lmkl_scalapack_ilp64 -lmkl_intel_ilp64 -lmkl_core -
lmkl_sequential -lpthread -lm

COMP_LIBS=dc_lapack.a liblapack.a libblas.a

NETCDF_LIBS=
NETCDF_INTERFACE=

LIBS=$(SCALAPACK_LIBS) $(BLACS_LIBS) $(LAPACK_LIBS) $(BLAS_LIBS) $(NETCDF_LIBS)

#SIESTA needs an F90 interface to MPI
#This will give you SIESTA's own implementation
#If your compiler vendor offers an alternative, you may change
#to it here.
MPI_INTERFACE=libmpi_f90.a
MPI_INCLUDE=/home-fn/compiler/mpi/openmpi-1.4.4-pgi/include
DEFS_MPI = -DMPI

#Dependency rules are created by autoconf according to whether
#discrete preprocessing is necessary or not.
.F.o:
        $(FC) -c $(FFLAGS) $(INCFLAGS) $(FPPFLAGS) $(FPPFLAGS_fixed_F)  $<
.F90.o:
        $(FC) -c $(FFLAGS) $(INCFLAGS) $(FPPFLAGS) $(FPPFLAGS_free_F90) $<
.f.o:
        $(FC) -c $(FFLAGS) $(INCFLAGS) $(FCFLAGS_fixed_f)  $<
.f90.o:
        $(FC) -c $(FFLAGS) $(INCFLAGS) $(FCFLAGS_free_f90)  $<
回复此楼

» 猜你喜欢

» 本主题相关价值贴推荐,对您同样有帮助:

已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

mywai520

铁杆木虫 (著名写手)


【答案】应助回帖

感谢参与,应助指数 +1
你的mpi在提交任务的节点上无法运行,可以先到节点测试一下。或者就用主机先并行测试一下。
2楼2014-05-13 18:38:51
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖
相关版块跳转 我要订阅楼主 pangrui1985 的主题更新
最具人气热帖推荐 [查看全部] 作者 回/看 最后发表
[公派出国] 售SCI文章,我:8O5.5.1.O.54,科目齐全,可+急 +3 1uaZt2kAZj2S 2026-10-31 5/250 2026-11-01 02:25 by YXM1FDCSE8Bn
[博后之家] 售SCI文章,我:8O5.5.1.O.54,科目齐全,可+急 +3 1uaZt2kAZj2S 2026-10-30 14/700 2026-11-01 02:06 by YXM1FDCSE8Bn
[考博] 售SCI一区文章,我:8.O.55.1.O.54,科目齐全,可伽急 +3 1uaZt2kAZj2S 2026-10-30 13/650 2026-11-01 02:02 by YXM1FDCSE8Bn
[基金申请] 售SCI一区文章,我:8.O.55.1.O.54,科目齐全,可伽急 +3 xvJS1BYDxvBS 2026-10-31 7/350 2026-11-01 00:54 by YXM1FDCSE8Bn
[考研] 售SCI一区文章,我:8O5.5.1.O5.4,科目全,可伽急 +3 xvJS1BYDxvBS 2026-10-31 6/300 2026-11-01 00:49 by YXM1FDCSE8Bn
[论文投稿] 售一区SCI文章T0P,我:8O.551.O54,科目全,可十急 +3 1uaZt2kAZj2S 2026-10-31 7/350 2026-11-01 00:48 by YXM1FDCSE8Bn
[找工作] 售一区SCI文章T0P,我:8O.551.O54,科目全,可十急 +3 1uaZt2kAZj2S 2026-10-31 5/250 2026-11-01 00:44 by YXM1FDCSE8Bn
[公派出国] 售一区SCI文章T0P,我:8O.551.O54,科目全,可十急 +3 1uaZt2kAZj2S 2026-10-31 4/200 2026-11-01 00:41 by YXM1FDCSE8Bn
[公派出国] 售SCI一区T0P文章,我:8.O.55.1.O.5.4,科目全,可+急 +3 1uaZt2kAZj2S 2026-10-30 12/600 2026-11-01 00:35 by YXM1FDCSE8Bn
[硕博家园] 售SCI一区T0P文章,我:8O.55.1.O.54,科目全,可伽急 +3 X5bHxOULxFqb 2026-10-30 15/750 2026-11-01 00:22 by YXM1FDCSE8Bn
[基金申请] 售SCI-T0P文章,我:8O.5.5.1.O.54,科目齐全,可+急 +5 X5bHxOULxFqb 2026-10-30 19/950 2026-11-01 00:17 by YXM1FDCSE8Bn
[硕博家园] 售SCI一区T0P文章,我:8.O55.1.O.54,科目全,可十急 +3 xvJS1BYDxvBS 2026-10-31 7/350 2026-10-31 23:18 by YXM1FDCSE8Bn
[考研] 售SCI一区T0P文章,我:8.O.55.1.O54,科目全,可伽急 +3 1uaZt2kAZj2S 2026-10-31 6/300 2026-10-31 23:17 by YXM1FDCSE8Bn
[博后之家] 售SCI一区文章,我:8O5.5.1.O5.4,科目全,可伽急 +3 1uaZt2kAZj2S 2026-10-31 5/250 2026-10-31 23:10 by YXM1FDCSE8Bn
[考博] 售SCI一区T0P文章,我:8.O.55.1.O.5.4,科目全,可+急 +4 X5bHxOULxFqb 2026-10-30 19/950 2026-10-31 22:44 by YXM1FDCSE8Bn
[基金申请] 售SCI一区T0P文章,我:8.O.55.1.O.54,科目齐全,可+急 +3 1uaZt2kAZj2S 2026-10-30 9/450 2026-10-31 21:34 by YXM1FDCSE8Bn
[基金申请] 论文的挂名怎么评判贡献?基金申请中,排名第一的挂名文章 +3 biily 2026-10-25 3/150 2026-10-30 18:33 by 旁观2020
[硕博家园] 申博自荐 2篇一区TOP+1篇EI+2公开发明专利 2027博士申请 +3 小小阿光 2026-10-27 3/150 2026-10-29 23:56 by 起风了的快乐
[文学芳草园] 闲聊 +3 myrtle 2026-10-25 6/300 2026-10-29 15:28 by myrtle
[考博] 申博求助 20+3 Katrinae 2026-10-26 4/200 2026-10-27 09:56 by 北京莱茵编辑
信息提示
请填处理意见