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Phony-Silvia

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[求助] vasp安装求助 已有1人参与

http://muchong.com/bbs/viewthread.php?tid=7943283&fpage=1&target=blank

我是完全按照这个网址装的VASP(ubuntu系统32位,串行安装法),已经成功生成libdmy.a文件,最后也有可能是vasp5.3的makefile.linux_ifc_P4 文件改的不对(可是我是按照教程改的),以至于总是出现如下图的结果。我已经安装了还多次,就是不对,我就不知道为啥了,求大神帮助

vasp安装求助
AEU3UYLE8C3IGI3RPH%D)]4.jpg
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Phony-Silvia

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有没有人啊,求你们帮帮我吧,这个软件少说了装了10天了,求好心大神帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧帮帮忙吧(楼主已疯,只求好心大神帮忙!)
2楼2015-03-16 18:31:27
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未岸亡灵

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【答案】应助回帖

感谢参与,应助指数 +1
图示结果没有报错,已经成功了吧
3楼2015-03-16 19:10:08
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Phony-Silvia

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引用回帖:
3楼: Originally posted by 未岸亡灵 at 2015-03-16 19:10:08
图示结果没有报错,已经成功了吧

我又重新装了一遍,有可能是安装成功了吧。但是以前安装出现这个结果的时候  我直接在这个界面输入“vasp”    显示的是没有这个命令   这是个什么情况?
4楼2015-03-16 20:30:33
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未岸亡灵

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引用回帖:
4楼: Originally posted by Phony-Silvia at 2015-03-16 20:30:33
我又重新装了一遍,有可能是安装成功了吧。但是以前安装出现这个结果的时候  我直接在这个界面输入“vasp”    显示的是没有这个命令   这是个什么情况?...

编译完成后,会生成一个新的可执行文件,名字就叫vasp。你要将当前目录下的这个vasp执行文件拷贝到linux环境变量目录下,比如 /bin 什么的,你直接敲vasp就有了
5楼2015-03-16 22:00:57
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Phony-Silvia

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引用回帖:
5楼: Originally posted by 未岸亡灵 at 2015-03-16 22:00:57
编译完成后,会生成一个新的可执行文件,名字就叫vasp。你要将当前目录下的这个vasp执行文件拷贝到linux环境变量目录下,比如 /bin 什么的,你直接敲vasp就有了...

在哪里安装就在哪里生成这个可执行文件吗?那如下图所示并没有生成这样一个文件,是要重新装吧?
vasp安装求助-1
70OG9$G%Z@SKOSTWTEO7[JC.jpg

6楼2015-03-17 08:21:14
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Phony-Silvia

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引用回帖:
5楼: Originally posted by 未岸亡灵 at 2015-03-16 22:00:57
编译完成后,会生成一个新的可执行文件,名字就叫vasp。你要将当前目录下的这个vasp执行文件拷贝到linux环境变量目录下,比如 /bin 什么的,你直接敲vasp就有了...

.SUFFIXES: .inc .f .f90 .F
#-----------------------------------------------------------------------
# Makefile for Intel Fortran compiler for Pentium/Athlon/Opteron
# bases systems
# we recommend this makefile for both Intel as well as AMD systems
# for AMD based systems appropriate BLAS and fftw libraries are
# however mandatory (whereas they are optional for Intel platforms)
#
# The makefile was tested only under Linux on Intel and AMD platforms
# the following compiler versions have been tested:
#  - ifc.7.1  works stable somewhat slow but reliably
#  - ifc.8.1  fails to compile the code properly
#  - ifc.9.1  recommended (both for 32 and 64 bit)
#  - ifc.10.1 partially recommended (both for 32 and 64 bit)
#             tested build 20080312 Package ID: l_fc_p_10.1.015
#             the gamma only mpi version can not be compiles
#             using ifc.10.1
#  - ifc.11.1 strongly recommended (we use this to compile vasp)
#             Build 20090630 Package ID: l_cprof_p_11.1.046
#
# it might be required to change some of library pathes, since
# LINUX installation vary a lot
# Hence check ***ALL*** options in this makefile very carefully
#-----------------------------------------------------------------------
#
# BLAS must be installed on the machine
# there are several options:
# 1) very slow but works:
#   retrieve the lapackage from ftp.netlib.org
#   and compile the blas routines (BLAS/SRC directory)
#   please use g77 or f77 for the compilation. When I tried to
#   use pgf77 or pgf90 for BLAS, VASP hang up when calling
#   ZHEEV  (however this was with lapack 1.1 now I use lapack 2.0)
# 2) more desirable: get an optimized BLAS
#
# the two most reliable packages around are presently:
# 2a) Intels own optimised BLAS (PIII, P4, PD, PC2, Itanium)
#     http://developer.intel.com/software/products/mkl/
#   this is really excellent, if you use Intel CPU's
#
# 2b) probably fastest SSE2 (4 GFlops on P4, 2.53 GHz, 16 GFlops PD,
#     around 30 GFlops on Quad core)
#   Kazushige Goto's BLAS
#   http://www.cs.utexas.edu/users/kgoto/signup_first.html
#   http://www.tacc.utexas.edu/resources/software/
#
#-----------------------------------------------------------------------

# all CPP processed fortran files have the extension .f90
SUFFIX=.f90

#-----------------------------------------------------------------------
# fortran compiler and linker
#-----------------------------------------------------------------------
FC=ifort
# fortran linker
FCL=$(FC)


#-----------------------------------------------------------------------
# whereis CPP ?? (I need CPP, can't use gcc with proper options)
# that's the location of gcc for SUSE 5.3
#
#  CPP_   =  /usr/lib/gcc-lib/i486-linux/2.7.2/cpp -P -C
#
# that's probably the right line for some Red Hat distribution:
#
#  CPP_   =  /usr/lib/gcc-lib/i386-redhat-linux/2.7.2.3/cpp -P -C
#
#  SUSE X.X, maybe some Red Hat distributions:

CPP_ =  ./preprocess <$*.F | /usr/bin/cpp -P -C -traditional >$*$(SUFFIX)

# this release should be fpp clean
# we now recommend fpp as preprocessor
# if this fails go back to cpp
CPP_=fpp -f_com=no -free -w0 $*.F $*$(SUFFIX)

#-----------------------------------------------------------------------
# possible options for CPP:
# NGXhalf             charge density   reduced in X direction
# wNGXhalf            gamma point only reduced in X direction
# avoidalloc          avoid ALLOCATE if possible
# PGF90               work around some for some PGF90 / IFC bugs
# CACHE_SIZE          1000 for PII,PIII, 5000 for Athlon, 8000-12000 P4, PD
# RPROMU_DGEMV        use DGEMV instead of DGEMM in RPRO (depends on used BLAS)
# RACCMU_DGEMV        use DGEMV instead of DGEMM in RACC (depends on used BLAS)
# tbdyn                 MD package of Tomas  Bucko
#-----------------------------------------------------------------------

CPP     = $(CPP_)  -DHOST=\"LinuxIFC\" \
          -DCACHE_SIZE=12000 -DPGF90 -Davoidalloc \
          -DRPROMU_DGEMV  -DRACCMU_DGEMV

#-----------------------------------------------------------------------
# general fortran flags  (there must a trailing blank on this line)
# byterecl is strictly required for ifc, since otherwise
# the WAVECAR file becomes huge
#-----------------------------------------------------------------------

FFLAGS =  -FR -lowercase -assume byterecl

#-----------------------------------------------------------------------
# optimization
# we have tested whether higher optimisation improves performance
# -axK  SSE1 optimization,  but also generate code executable on all mach.
#       xK improves performance somewhat on XP, and a is required in order
#       to run the code on older Athlons as well
# -xW   SSE2 optimization
# -axW  SSE2 optimization,  but also generate code executable on all mach.
# -tpp6 P3 optimization
# -tpp7 P4 optimization
#-----------------------------------------------------------------------

# ifc.9.1, ifc.10.1 recommended
OFLAG=-O2 -xhost -ip -funroll-loops

OFLAG_HIGH = $(OFLAG)
OBJ_HIGH =
OBJ_NOOPT =
DEBUG  = -FR -O0
INLINE = $(OFLAG)

#-----------------------------------------------------------------------
# the following lines specify the position of BLAS  and LAPACK
# VASP works fastest with the libgoto library
# so that's what we recommend
#-----------------------------------------------------------------------

# mkl.10.0
# set -DRPROMU_DGEMV  -DRACCMU_DGEMV in the CPP lines
#BLAS=-L/opt/intel/mkl100/lib/em64t -lmkl -lpthread

# even faster for VASP Kazushige Goto's BLAS
# http://www.cs.utexas.edu/users/kgoto/signup_first.html
# parallel goto version requires sometimes -libverbs
BLAS=-L/opt/intel/composer_xe_2013.2.146/mkl/lib/ia32 -lmkl_intel -lmkl_sequential -lmkl_core -lpthread

# LAPACK, simplest use vasp.5.lib/lapack_double
LAPACK=-L/opt/intel/composer_xe_2013.2.146/mkl/lib/ia32 -lmkl_intel -lmkl_sequential -lmkl_core -lpthread

# use the mkl Intel lapack
#LAPACK= -lmkl_lapack

#-----------------------------------------------------------------------

LIB  = -L../vasp.5.lib -ldmy \
     ../vasp.5.lib/linpack_double.o $(LAPACK) \
     $(BLAS)

# options for linking, nothing is required (usually)
LINK    =

#-----------------------------------------------------------------------
# fft libraries:
# VASP.5.2 can use fftw.3.1.X (http://www.fftw.org)
# since this version is faster on P4 machines, we recommend to use it
#-----------------------------------------------------------------------

FFT3D   = fft3dfurth.o fft3dlib.o

# alternatively: fftw.3.1.X is slighly faster and should be used if available
#FFT3D   = fftw3d.o fft3dlib.o   /opt/libs/fftw-3.1.2/lib/libfftw3.a


#=======================================================================
# MPI section, uncomment the following lines until
#    general  rules and compile lines
# presently we recommend OPENMPI, since it seems to offer better
# performance than lam or mpich
#
# !!! Please do not send me any queries on how to install MPI, I will
# certainly not answer them !!!!
#=======================================================================
#-----------------------------------------------------------------------
# fortran linker for mpi
#-----------------------------------------------------------------------

#FC=mpif90
#FCL=$(FC)

#-----------------------------------------------------------------------
# additional options for CPP in parallel version (see also above):
# NGZhalf               charge density   reduced in Z direction
# wNGZhalf              gamma point only reduced in Z direction
# scaLAPACK             use scaLAPACK (usually slower on 100 Mbit Net)
# avoidalloc          avoid ALLOCATE if possible
# PGF90               work around some for some PGF90 / IFC bugs
# CACHE_SIZE          1000 for PII,PIII, 5000 for Athlon, 8000-12000 P4, PD
# RPROMU_DGEMV        use DGEMV instead of DGEMM in RPRO (depends on used BLAS)
# RACCMU_DGEMV        use DGEMV instead of DGEMM in RACC (depends on used BLAS)
# tbdyn                 MD package of Tomas  Bucko
#-----------------------------------------------------------------------

#-----------------------------------------------------------------------

#CPP    = $(CPP_) -DMPI  -DHOST=\"LinuxIFC\" -DIFC \
#     -DCACHE_SIZE=4000 -DPGF90 -Davoidalloc \
#     -DMPI_BLOCK=500 -Duse_collective
#    -DRPROMU_DGEMV  -DRACCMU_DGEMV

#-----------------------------------------------------------------------
# location of SCALAPACK
# if you do not use SCALAPACK simply leave that section commented out
#-----------------------------------------------------------------------

#BLACS=$(HOME)/archives/SCALAPACK/BLACS/
#SCA_=$(HOME)/archives/SCALAPACK/SCALAPACK

#SCA= $(SCA_)/libscalapack.a  \
# $(BLACS)/LIB/blacsF77init_MPI-LINUX-0.a $(BLACS)/LIB/blacs_MPI-LINUX-0.a $(BLACS)/LIB/blacsF77init_MPI-LINUX-0.a

SCA=

#-----------------------------------------------------------------------
# libraries for mpi
#-----------------------------------------------------------------------

#LIB     = -L../vasp.5.lib -ldmy  \
#      ../vasp.5.lib/linpack_double.o $(LAPACK) \
#      $(SCA) $(BLAS)

# FFT: fftmpi.o with fft3dlib of Juergen Furthmueller
#FFT3D   = fftmpi.o fftmpi_map.o fft3dfurth.o fft3dlib.o

# alternatively: fftw.3.1.X is slighly faster and should be used if available
#FFT3D   = fftmpiw.o fftmpi_map.o fftw3d.o fft3dlib.o  /opt/libs/fftw-3.1.2/lib/libfftw3.a

#-----------------------------------------------------------------------
# general rules and compile lines
#-----------------------------------------------------------------------
BASIC=   symmetry.o symlib.o   lattlib.o  random.o   


SOURCE=  base.o     mpi.o      smart_allocate.o      xml.o  \
         constant.o jacobi.o   main_mpi.o  scala.o   \
         asa.o      lattice.o  poscar.o   ini.o  mgrid.o  xclib.o  vdw_nl.o  xclib_grad.o \
         radial.o   pseudo.o   gridq.o     ebs.o  \
         mkpoints.o wave.o     wave_mpi.o  wave_high.o  spinsym.o \
         $(BASIC)   nonl.o     nonlr.o    nonl_high.o dfast.o    choleski2.o \
         mix.o      hamil.o    xcgrad.o   xcspin.o    potex1.o   potex2.o  \
         constrmag.o cl_shift.o relativistic.o LDApU.o \
         paw_base.o metagga.o  egrad.o    pawsym.o   pawfock.o  pawlhf.o   rhfatm.o  hyperfine.o paw.o   \
         mkpoints_full.o       charge.o   Lebedev-Laikov.o  stockholder.o dipol.o    pot.o \
         dos.o      elf.o      tet.o      tetweight.o hamil_rot.o \
         chain.o    dyna.o     k-proj.o    sphpro.o    us.o  core_rel.o \
         aedens.o   wavpre.o   wavpre_noio.o broyden.o \
         dynbr.o    hamil_high.o  rmm-diis.o reader.o   writer.o   tutor.o xml_writer.o \
         brent.o    stufak.o   fileio.o   opergrid.o stepver.o  \
         chgloc.o   fast_aug.o fock_multipole.o  fock.o  mkpoints_change.o sym_grad.o \
         mymath.o   internals.o dynconstr.o dimer_heyden.o dvvtrajectory.o vdwforcefield.o \
         nmr.o      pead.o     subrot.o   subrot_scf.o \
         force.o    pwlhf.o    gw_model.o optreal.o  steep.o    davidson.o  david_inner.o \
         electron.o rot.o  electron_all.o shm.o    pardens.o  paircorrection.o \
         optics.o   constr_cell_relax.o   stm.o    finite_diff.o elpol.o    \
         hamil_lr.o rmm-diis_lr.o  subrot_cluster.o subrot_lr.o \
         lr_helper.o hamil_lrf.o   elinear_response.o ilinear_response.o \
         linear_optics.o \
         setlocalpp.o  wannier.o electron_OEP.o electron_lhf.o twoelectron4o.o \
         mlwf.o     ratpol.o screened_2e.o wave_cacher.o chi_base.o wpot.o \
         local_field.o ump2.o  bse_te.o bse.o acfdt.o chi.o sydmat.o dmft.o \
         rmm-diis_mlr.o  linear_response_NMR.o wannier_interpol.o linear_response.o

vasp: $(SOURCE) $(FFT3D) $(INC) main.o
        rm -f vasp
        $(FCL) -o vasp main.o  $(SOURCE)   $(FFT3D) $(LIB) $(LINK)
makeparam: $(SOURCE) $(FFT3D) makeparam.o main.F $(INC)
        $(FCL) -o makeparam  $(LINK) makeparam.o $(SOURCE) $(FFT3D) $(LIB)
zgemmtest: zgemmtest.o base.o random.o $(INC)
        $(FCL) -o zgemmtest $(LINK) zgemmtest.o random.o base.o $(LIB)
dgemmtest: dgemmtest.o base.o random.o $(INC)
        $(FCL) -o dgemmtest $(LINK) dgemmtest.o random.o base.o $(LIB)
ffttest: base.o smart_allocate.o mpi.o mgrid.o random.o ffttest.o $(FFT3D) $(INC)
        $(FCL) -o ffttest $(LINK) ffttest.o mpi.o mgrid.o random.o smart_allocate.o base.o $(FFT3D) $(LIB)
kpoints: $(SOURCE) $(FFT3D) makekpoints.o main.F $(INC)
        $(FCL) -o kpoints $(LINK) makekpoints.o $(SOURCE) $(FFT3D) $(LIB)

clean:       
        -rm -f *.g *.f *.o *.L *.mod ; touch *.F

main.o: main$(SUFFIX)
        $(FC) $(FFLAGS)$(DEBUG)  $(INCS) -c main$(SUFFIX)
xcgrad.o: xcgrad$(SUFFIX)
        $(FC) $(FFLAGS) $(INLINE)  $(INCS) -c xcgrad$(SUFFIX)
xcspin.o: xcspin$(SUFFIX)
        $(FC) $(FFLAGS) $(INLINE)  $(INCS) -c xcspin$(SUFFIX)

makeparam.o: makeparam$(SUFFIX)
        $(FC) $(FFLAGS)$(DEBUG)  $(INCS) -c makeparam$(SUFFIX)

makeparam$(SUFFIX): makeparam.F main.F
#
# MIND: I do not have a full dependency list for the include
# and MODULES: here are only the minimal basic dependencies
# if one strucuture is changed then touch_dep must be called
# with the corresponding name of the structure
#
base.o: base.inc base.F
mgrid.o: mgrid.inc mgrid.F
constant.o: constant.inc constant.F
lattice.o: lattice.inc lattice.F
setex.o: setexm.inc setex.F
pseudo.o: pseudo.inc pseudo.F
mkpoints.o: mkpoints.inc mkpoints.F
wave.o: wave.F
nonl.o: nonl.inc nonl.F
nonlr.o: nonlr.inc nonlr.F

$(OBJ_HIGH):
        $(CPP)
        $(FC) $(FFLAGS) $(OFLAG_HIGH) $(INCS) -c $*$(SUFFIX)
$(OBJ_NOOPT):
        $(CPP)
        $(FC) $(FFLAGS) $(INCS) -c $*$(SUFFIX)

fft3dlib_f77.o: fft3dlib_f77.F
        $(CPP)
        $(F77) $(FFLAGS_F77) -c $*$(SUFFIX)

.F.o:
        $(CPP)
        $(FC) $(FFLAGS) $(OFLAG) $(INCS) -c $*$(SUFFIX)
.F$(SUFFIX):
        $(CPP)
$(SUFFIX).o:
        $(FC) $(FFLAGS) $(OFLAG) $(INCS) -c $*$(SUFFIX)

# special rules
#-----------------------------------------------------------------------
# these special rules have been tested for ifc.11 and ifc.12 only

fft3dlib.o : fft3dlib.F
        $(CPP)
        $(FC) -FR -lowercase -O2 -c $*$(SUFFIX)
fft3dfurth.o : fft3dfurth.F
        $(CPP)
        $(FC) -FR -lowercase -O1 -c $*$(SUFFIX)
fftw3d.o : fftw3d.F
        $(CPP)
        $(FC) -FR -lowercase -O1 -c $*$(SUFFIX)
fftmpi.o : fftmpi.F
        $(CPP)
        $(FC) -FR -lowercase -O1 -c $*$(SUFFIX)
fftmpiw.o : fftmpiw.F
        $(CPP)
        $(FC) -FR -lowercase -O1 $(INCS) -c $*$(SUFFIX)
wave_high.o : wave_high.F
        $(CPP)
        $(FC) -FR -lowercase -O1 -c $*$(SUFFIX)
# the following rules are probably no longer required (-O3 seems to work)
wave.o : wave.F
        $(CPP)
        $(FC) -FR -lowercase -O2 -c $*$(SUFFIX)
paw.o : paw.F
        $(CPP)
        $(FC) -FR -lowercase -O2 -c $*$(SUFFIX)
cl_shift.o : cl_shift.F
        $(CPP)
        $(FC) -FR -lowercase -O2 -c $*$(SUFFIX)
us.o : us.F
        $(CPP)
        $(FC) -FR -lowercase -O2 -c $*$(SUFFIX)
LDApU.o : LDApU.F
        $(CPP)
        $(FC) -FR -lowercase -O2 -c $*$(SUFFIX)
7楼2015-03-17 09:45:05
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Phony-Silvia

新虫 (小有名气)

引用回帖:
5楼: Originally posted by 未岸亡灵 at 2015-03-16 22:00:57
编译完成后,会生成一个新的可执行文件,名字就叫vasp。你要将当前目录下的这个vasp执行文件拷贝到linux环境变量目录下,比如 /bin 什么的,你直接敲vasp就有了...

我把makefile.linux_ifc_P4文件粘贴过来了   麻烦您指点一下,看看这个文件有什么不妥,还请您帮忙
8楼2015-03-17 09:46:55
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未岸亡灵

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Phony-Silvia: 金币+20, ★★★★★最佳答案 2015-03-17 11:13:04
引用回帖:
8楼: Originally posted by Phony-Silvia at 2015-03-17 09:46:55
我把makefile.linux_ifc_P4文件粘贴过来了   麻烦您指点一下,看看这个文件有什么不妥,还请您帮忙...

不是看看makefile就能解决的问题,我感觉你的linux管理知识可能稍有些欠缺,还停留在windows的概念,如果不着急毕业,可以稍学习一下关于linux的知识。
编译好的vasp执行文件在vasp.5.3的文件夹中。

谢谢红花!
9楼2015-03-17 10:39:12
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Phony-Silvia

新虫 (小有名气)

引用回帖:
9楼: Originally posted by 未岸亡灵 at 2015-03-17 10:39:12
不是看看makefile就能解决的问题,我感觉你的linux管理知识可能稍有些欠缺,还停留在windows的概念,如果不着急毕业,可以稍学习一下关于linux的知识。
编译好的vasp执行文件在vasp.5.3的文件夹中。

谢谢红花!...

谢谢您的帮助,我确实是刚刚开始捣鼓linux系统,也刚刚开始装的软件,很多东西确实不了解。


谢谢您的指点 ,我会尽量学习关于linux 的知识的。
10楼2015-03-17 11:12:56
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