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ranger2911

ľ³æ (СÓÐÃûÆø)


[½»Á÷] ÀûÓÃVASP½øÐÐÊÕÁ²ÐÔ²âÊÔ£¬Ñ­»·¼ÆËãÖÐ;ֹͣÎÊÌâ

±¾È˸ոտªÊ¼½Ó´¥VASP£¬Ïë²âÊÔFCC NiµÄ½Ø¶ÏÄÜ£¬µ«ÊÇÌá½»ÈÎÎñºó³ÌÐò×ÜÊÇÖÐ;ֹͣ£¬ÏëÇë¸÷λ´óÏÀ°ïæ¿´¿´ÎÊÌâ³öÔÚÄÄÀï¡£ÏÂÃæÊÇÏà¹ØµÄÊäÈëÎļþ£º
1¡¢POSCAR
FCC Ni
1.0
3.5299999714         0.0000000000         0.0000000000
0.0000000000         3.5299999714         0.0000000000
0.0000000000         0.0000000000         3.5299999714
4
Direct
0.000000000         0.000000000         0.000000000
0.000000000         0.500000000         0.500000000
0.500000000         0.000000000         0.500000000
0.500000000         0.500000000         0.000000000

2¡¢KPOINTS £¨ÓÉÓÚÊÇÏȲâÊÔENCUT£¬ËùÒÔKPOINTSÉ趨ÁËÒ»¸öÏà¶Ô½Ï´óµÄÖµ£©
Automatic
0
Monkhorst-Pack
25 25 25
0 0 0

3¡¢POTCAR
POTCARÊǸù¾ÝUser's GuideµÚ10ÕÂÖиø³öµÄÍÆ¼öÖµ

4¡¢INCAR
ÕâÀïµÄINCARÎļþʹÓÃPBS½Å±¾Îļþ´úÌæ
#PBS -l nodes=2:ppn=8      

NPROC=`wc -l $PBS_NODEFILE|cut -f1 -d" "`

cd $PBS_O_WORKDIR
for a in 250 300 350 400 450 500 550 600 650 700 750 800
do
rm -f WAVECAR
cat >INCAR<<!
SYSTEM = FCC Ni
ISTART = 0; ICHARG = 2
ENCUT = $a
PREC = Accurate
ISMEAR = -5
NSW = 0; IBRION = -1
ISPIN = 2
!
echo a=$a
/public/software/mpi/openmpi1.3.4-intel/bin/mpirun -mca btl openib,self -np $NPROC /public/software/vasp/vasp-openmpi-ifort
E=`tail -1 OSZICAR`
echo $a $E>>result
done

ÏÖÔÚµÄÎÊÌâÊÇÌá½»ÈÎÎñÖ®ºó³ÌÐò»áÔËÐÐÒ»¶Îʱ¼ä£¬µ«ÊǹýÒ»»á¾ÍÍ£Ö¹ÁË£¬²¢Ã»ÓÐÅÜÍêËùÓÐÉ趨µÄÑ­»·Öµ£¬WAVECARΪ0K£¬²¢¸ø³öÏÂÃæµÄÌáʾ£º
a=300
running on   16 nodes
distr:  one band on    1 nodes,   16 groups
vasp.4.6.28 25Jul05 complex
POSCAR found :  1 types and    4 ions
LDA part: xc-table for Pade appr. of Perdew
POSCAR, INCAR and KPOINTS ok, starting setup
FFT: planning ...           1
reading WAVECAR
entering main loop
       N       E                     dE             d eps       ncg     rms          rms(c)
16 total processes killed (some possibly by mpirun during cleanup)

ÁíÒ»¸öÊä³öÎļþ¸ø³öÕâÑùµÄÐÅÏ¢
=>> PBS: job killed: walltime 3641 exceeded limit 3600
mpirun: killing job...

--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 20528 on node node13 exited on signal 0 (Unknown signal 0).
--------------------------------------------------------------------------
mpirun: clean termination accomplished

ÎÒÔÚÕâÀï¾À½áÒ»Ìì¶àÁË£¬Á¬¸ö½Ø¶ÏÄܶ¼Ã»Ëã³öÀ´£¬»¹Çë¸÷λ´óÏÀ°ïæÕÒÕÒÎÊÌâ°¡~
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ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

yuenanshuyao

гæ (³õÈëÎÄ̳)


¡ï
Сľ³æ: ½ð±Ò+0.5, ¸ø¸öºì°ü£¬Ð»Ð»»ØÌû
ÒýÓûØÌû:
2Â¥: Originally posted by emilyoyang at 2014-03-02 23:45:32
ÔÚPBS×÷ÒµÌá½»½Å±¾ÀïÃæµÄ#PBS -l nodes=2:ppn=8  ÏÂÃæÌí¼ÓÏÂÃæÒ»ÐÐÊÔÊÔ
#PBS -l walltime=240:00:00

ÇëÎÊΪʲôҪ¼ÓÕâÐУ¬ÄܽâÊÍÏÂÂð
3Â¥2016-05-10 13:50:15
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû
²é¿´È«²¿ 4 ¸ö»Ø´ð

emilyoyang

ľ³æ (ÕýʽдÊÖ)


¡ï ¡ï ¡ï ¡ï ¡ï ¡ï
Сľ³æ: ½ð±Ò+0.5, ¸ø¸öºì°ü£¬Ð»Ð»»ØÌû
ranger2911: ½ð±Ò+5, ¶àлÄãµÄ»Ø´ð£¬È·ÊµÊÇÕâô»ØÊ°¡~ 2014-03-03 18:00:43
ÔÚPBS×÷ÒµÌá½»½Å±¾ÀïÃæµÄ#PBS -l nodes=2:ppn=8  ÏÂÃæÌí¼ÓÏÂÃæÒ»ÐÐÊÔÊÔ
#PBS -l walltime=240:00:00
2Â¥2014-03-02 23:45:32
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

emilyoyang

ľ³æ (ÕýʽдÊÖ)


¡ï
Сľ³æ: ½ð±Ò+0.5, ¸ø¸öºì°ü£¬Ð»Ð»»ØÌû
ÒýÓûØÌû:
3Â¥: Originally posted by yuenanshuyao at 2016-05-10 13:50:15
ÇëÎÊΪʲôҪ¼ÓÕâÐУ¬ÄܽâÊÍÏÂÂð...


the default setting of walltime is too short for your testing.
This line says you set the walltime 240hrs.(10days, may be somewhat longer, but it does work)
4Â¥2016-05-11 06:46:08
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû
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