²é¿´: 1095  |  »Ø¸´: 4

nufang19a

½ð³æ (ÕýʽдÊÖ)


[½»Á÷] ¡¾ÇóÖú¡¿NAMD: water boxʱ£¬Á¢·½Ë®ÌåµÄ±ß½ç¸ÃÔõÑùÈ·¶¨£¿ÏÈлÁË ÒÑÓÐ3È˲ÎÓë

ÔÚÉú³ÉÁ¢·½Ë®ÌåʱÓõ½µÄÃüÁîÊÇ£º

package require solvate

solvate ***.psf   ***.pdb -t * -o ***

ÏÖÔÚÓиöÎÊÌ⣺

²ÎÊý-t * ÊÇ֪ͨ³ÌÐòÈçºÎÈ·¶¨Á¢·½Ë®ÌåµÄ¸ö±ß³¤¡££¨Ã¿¸ö×ø±ê·½ÏòÉÏÑ¡Ôñ×ø±ê×î´óµÄÄǸöÔ­×Ó£¬È»ºóÔÙÑÓÉì*A£©£¬ÄÇôÕâ¸ö-tºóµÄ*²ÎÊýÊÇÔõÑùÈ·¶¨µÄÄØ£¿£¿Íû¸÷λ¸ßÊÖÖ¸µã£¬ÆÚ´ý´ó¼ÒµÄ»Ø¸´£¬Ð»Ð»¸÷λÁË
»Ø¸´´ËÂ¥

» ²ÂÄãϲ»¶

» ±¾Ö÷ÌâÏà¹Ø¼ÛÖµÌùÍÆ¼ö£¬¶ÔÄúͬÑùÓаïÖú:

ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

nufang19a

½ð³æ (ÕýʽдÊÖ)


×Ô¼º¶¥ÉÏÈ¥£¬ÆÚ´ý»Ø¸´
2Â¥2010-12-10 10:02:02
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

zhaoyanfei

ľ³æ (СÓÐÃûÆø)

¡ï
Сľ³æ(½ð±Ò+0.5):¸ø¸öºì°ü£¬Ð»Ð»»ØÌû½»Á÷

Äã¿ÉÒÔ¿´ÏÂsolvateÈí¼þ°ü
ÒÔÐéÑøÐÄ£¬ÒÔµÂÑøÉí£¬ÒÔÈÊÒåÑøÌìÏÂÍòÎÒÔµÀÑøÌìÏÂÍòÊÀ
3Â¥2011-02-20 14:11:56
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

wally8962

ľ³æ (ÖøÃûдÊÖ)

¡ï ¡ï ¡ï ¡ï ¡ï ¡ï
Сľ³æ(½ð±Ò+0.5):¸ø¸öºì°ü£¬Ð»Ð»»ØÌû½»Á÷
zh1987hs(½ð±Ò+5): Õâ¸ö´ð°¸±È½ÏÏêϸ£¬ÎÒÒ»°ã¶¼ÓÃ1nm£¬ºÇºÇ 2011-02-21 22:31:07

ÖÜÆÚÐԺиÃÈ¡¶à´ó£¿

»ù±¾Ô­ÔòÊÇ£¬²»ÈÃÄã¹ØÐĵÄÄ¿±ê£¨µ°°×ÖÊ£©ÄÜ×÷Óõ½ÁíÒ»¸ö¾µÏñÖеÄ×ÔÉí£¬Ò²¼´ºÐ×ӳߴçÒª´óÓÚ³¤³Ì×÷Óýضϰ뾶+µ°°×Öʳߴç

Ëæ×żÆËã»úËٶȵÄÌáÉý£¬ÏÖÔÚÓÖÇãÏòÓÚÁíÒ»¸ö×¼Ôò£¬²»ÈÃÄãÁ½¸öºÐ×ÓÖеÄÄ¿±êÄÜͬʱ×÷ÓÃÒ»¸öË®·Ö×Ó£¬Ò²¼´ºÐ×ӳߴçÒª´óÓÚ³¤³Ì×÷Óýضϰ뾶*2+µ°°×Öʳߴç
4Â¥2011-02-20 22:07:10
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

nufang19a

½ð³æ (ÕýʽдÊÖ)



ллwally8962µÄ¹Ø×¢£¬Ð»Ð»ÄãµÄÌáʾ
5Â¥2011-02-21 10:57:59
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû
Ïà¹Ø°æ¿éÌø×ª ÎÒÒª¶©ÔÄÂ¥Ö÷ nufang19a µÄÖ÷Ìâ¸üÐÂ
×î¾ßÈËÆøÈÈÌûÍÆ¼ö [²é¿´È«²¿] ×÷Õß »Ø/¿´ ×îºó·¢±í
[¿¼ÑÐ] 286Çóµ÷¼Á +3 lemonzzn 2026-03-16 5/250 2026-03-16 20:43 by lemonzzn
[¿¼ÑÐ] ¿¼Ñл¯Ñ§Ñ§Ë¶µ÷¼Á£¬Ò»Ö¾Ô¸985 +3 ÕÅvvvv 2026-03-15 5/250 2026-03-16 20:25 by ÕÅvvvv
[¿¼ÑÐ] »¯Ñ§µ÷¼Á0703 +8 °¡ÎÒÎÒµÄ 2026-03-11 8/400 2026-03-16 17:23 by ÎҵĴ¬Îҵĺ£
[¿¼ÑÐ] 326Çóµ÷¼Á +4 ŵ±´¶û»¯Ñ§½±êéê 2026-03-15 7/350 2026-03-16 17:11 by ŵ±´¶û»¯Ñ§½±êéê
[¿¼ÑÐ] 0703»¯Ñ§µ÷¼Á £¬Áù¼¶Òѹý£¬ÓпÆÑо­Àú +7 êØÎõÙâ 2026-03-15 7/350 2026-03-16 16:34 by houyaoxu
[¿¼ÑÐ] 080500£¬²ÄÁÏѧ˶302·ÖÇóµ÷¼ÁѧУ +4 ³õʶ¿ÉÀÖ 2026-03-14 5/250 2026-03-14 21:08 by peike
[»ù½ðÉêÇë] ÃæÉϺÍÇà»ùÒ»ÑùÏÞ30Ò³²»ºÏÀí +5 wowsunflower 2026-03-10 7/350 2026-03-14 17:21 by kingkocxr
[¿¼ÑÐ] Ò»Ö¾Ô¸¹þ¹¤´ó²ÄÁÏ324·ÖÇóµ÷¼Á +5 ãÆÐñ¶« 2026-03-14 5/250 2026-03-14 14:53 by ľ¹Ï¸à
[¿¼ÑÐ] 318Çóµ÷¼Á +3 Àîйâ 2026-03-10 3/150 2026-03-14 00:21 by JourneyLucky
[¿¼ÑÐ] 290Çóµ÷¼Á +9 ADT 2026-03-11 9/450 2026-03-13 21:55 by JourneyLucky
[¿¼ÑÐ] 315Çóµ÷¼Á +9 СÑòСÑò_ 2026-03-11 10/500 2026-03-13 21:13 by SXNUÀîÀÏʦ
[¿¼ÑÐ] 0703»¯Ñ§Çóµ÷¼Á +7 Â̶¹ÇÛ²ËÌÀ 2026-03-12 7/350 2026-03-13 17:25 by njzyff
[¿¼ÑÐ] 310Çóµ÷¼Á +3 ¡¾ÉÏÉÏÇ©¡¿ 2026-03-11 3/150 2026-03-13 16:16 by JourneyLucky
[¿¼ÑÐ] ¹¤¿Æ²ÄÁÏ085601 279Çóµ÷¼Á +8 À§ÓÚÐdz¿ 2026-03-12 10/500 2026-03-13 15:42 by ms629
[¿¼ÑÐ] 274Çóµ÷¼Á +3 S.H1 2026-03-12 3/150 2026-03-13 15:15 by JourneyLucky
[¿¼ÑÐ] 289Çóµ÷¼Á +3 ÀîÕþÓ¨ 2026-03-12 3/150 2026-03-13 11:02 by Çóµ÷¼Ázz
[¿¼²©] 26¶Á²© +4 Rui135246 2026-03-12 10/500 2026-03-13 07:15 by gaobiao
[¿¼ÑÐ] 420Çóµ÷¼Á +4 ĪÏòÍâÇó11 2026-03-10 6/300 2026-03-12 14:41 by ruiyingmiao
[¿¼ÑÐ] Ñо¿ÉúÕÐÉú +3 Ð캣ÌÎ11 2026-03-10 7/350 2026-03-12 14:26 by Ð캣ÌÎ11
[¿¼²©] 26É격ÇóÖú +3 ÌøÔ¾±ý¸É 2026-03-10 4/200 2026-03-10 21:15 by Tntcnn
ÐÅÏ¢Ìáʾ
ÇëÌî´¦ÀíÒâ¼û