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bay__gulf金虫 (著名写手)
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【在线答疑】关于NAMD/VMD 已有27人参与
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vincentye
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小木虫(金币+0.5):给个红包，谢谢回帖交流
小木虫(金币+0.5):给个红包，谢谢回帖交流
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楼主，我在windows下使用x-win32 9.1 远程连接ubuntu9.04，上面装有vmd 我按照vmd官网上的说明，对x-win32进行了设置，说明如下 Using the VMD GUI on Windows To get the graphical user interfaces for VMD on Windows using XWin-32 and putty may require an additional step to get the OpenGL library (compared to the usual procedure to get an X-Window). Right click on the XWin-32 button and go the Xconfig. Open the Other tab. Depending on the version of X-Win32, check the box labeled OpenGL Software Rendering .. or the box labeled GLX Buffering. Then restart X-Win32. As usual when using putty, go to the ssh tab, and make sure X11 tunneling is "on". On some versions of putty, this is under "tunneling". This allows you to get an X-Window on the HPC VCL image. You can check whether you can get a X-Window by typing: xclock & at the command line. 出现以下结果 ye@xjning:~$ vmd rlwrap: Command not found. Info) VMD for LINUXAMD64, version 1.8.7 (August 1, 2009) Info) http://www.ks.uiuc.edu/Research/vmd/ Info) Email questions and bug reports to vmd@ks.uiuc.edu Info) Please include this reference in published work using VMD: Info) Humphrey, W., Dalke, A. and Schulten, K., `VMD - Visual Info) Molecular Dynamics', J. Molec. Graphics 1996, 14.1, 33-38. Info) ------------------------------------------------------------- Info) Multithreading available, 8 CPUs detected. Info) Free system memory: 11424MB (96%) Info) No CUDA accelerator devices available. Xlib: extension "Generic Event Extension" missing on display "localhost:10.0". ERROR) A TrueColor visual is required, but not available. ERROR) The X server is not capable of displaying double-buffered, ERROR) RGB images with a Z buffer. Exiting ... Info) VMD for LINUXAMD64, version 1.8.7 (August 1, 2009) Info) Unable to create OpenGL window. 然后我用putty，将x11设置为on，输入xclock &，也出现了系统的钟，但是输入vmd，和x-win32显示的一样,不知能否帮忙解决一下！谢谢！ [ Last edited by vincentye on 2010-2-23 at 19:03 ] |
125楼2010-02-23 18:51:50
2楼2009-05-02 11:58:42
bay__gulf
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lei0736(金币+4,VIP+0):谢谢 又添猛将 5-3 16:09
lei0736(金币+4,VIP+0):谢谢 又添猛将 5-3 16:09
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【回2楼】 可以，比如下面这篇文献 Bryan J. Johnson, Jordi Cohen, Richard W. Welford, Arwen R. Pearson, Klaus Schulten, Judith P. Klinman, and Carrie M. Wilmot. Exploring molecular oxygen pathways in Hanseluna Polymorpha copper-containing amine oxidase. Journal of Biological Chemistry, 282:17767-17776, 2007. [ Last edited by bay__gulf on 2009-5-2 at 13:21 ] |
3楼2009-05-02 13:13:06
4楼2009-05-02 13:45:28
