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1239249493

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[求助] 求助amber算径向分布函数(RDF)详细步骤! 已有1人参与

请问各位谁会用amber中的cpptraj算径向分布函数(RDF)?求详细步骤,谢谢!
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brucefan

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【答案】应助回帖

感谢参与,应助指数 +1
It is very easy to write a code to compute RDF after you have a trajectory.
Why always rely on such black boxes?
Check the matlab code I provided:
http://blog.sciencenet.cn/blog-3102863-1084245.html
Also note that you may need to extend or modify it before you can use it.
Therefore, it is important that you understand the theory and algorithm.

So here is the 详细步骤:
1) read a good MD or statistical physics book on RDF;
2) write a few tens of lines code to solve this problem.
2楼2017-12-06 06:02:50
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