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#  MD options
#
integrator leapfrog verlet
ensemble nvt 0.05
temperature 300
equil 0.5 ps
produ 0.20 ps
timestep 0.0001 ps
sample 0.01 ps
write 0.01 ps
#

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ÔÂÖ»À¶: ½ð±Ò+1, ¹ÄÀø½»Á÷£¡ 2014-06-16 19:42:37
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3Â¥: Originally posted by curieshicy at 2014-06-06 03:17:13
Ðè²»ÐèÒªÔÚequil 0.5ps ºÍ produ 0.20 psÖ®¼ä¼ÓÈë ensemble nve ÕâÑù³ÌÐòÖªµÀproduction ½×¶ÎÓÃnve

¡°integrator leapfrog verlet
ensemble nvt 0.05
temperature 300
equil 0.5 ps

ENSEMBLE NVE

prod ...

you need to understand the difference between ensembles and equilibrium/production procedures, they are independent concepts
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4Â¥2014-06-07 18:14:28
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ensemble nve
ensemble nvt 0.05
ensemble npt 0.05 0.5
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curieshicy

Òø³æ (³õÈëÎÄ̳)

Ðè²»ÐèÒªÔÚequil 0.5ps ºÍ produ 0.20 psÖ®¼ä¼ÓÈë ensemble nve ÕâÑù³ÌÐòÖªµÀproduction ½×¶ÎÓÃnve

¡°integrator leapfrog verlet
ensemble nvt 0.05
temperature 300
equil 0.5 ps

ENSEMBLE NVE

produ 0.20 ps
timestep 0.0001 ps
sample 0.01 ps
write 0.01 ps
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3Â¥2014-06-06 10:17:13
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû
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