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[资源] 一个法国人自己整理的免费软件列表

Free computer tools in Structural Bioinformatics and Chemoinformatics
http://www.vls3d.com/links.html

Table I: Patent search   
Table II: Chemistry toolkits, graphics (small and macro-molecules), other links to bioinformatics and utilities   
Table III: ADME/tox prediction and databases   
Table IV: Free compound collections, target-ligand databases and utilities   
Table V: Small molecules 2D-to-3D, 2D or 3D search and de novo ligand builder   
Table VIa: Receptor 3D structures, homology modeling, structure prediction and macromolecular interaction databases     
Table VIb: Pocket prediction and search for functional regions on targets, analysis of interfaces, Protein docking   
Table VII: Comparison of binding sites/protein functional sites – protein function prediction (see also Table VIb)   
Table VIII: Target analysis: flexibility – energy minimization – normal modes – molecular dynamics –water molecules in target – ions – pKa and electrostatics – point mutations and related utilities
Table IX: Docking and/or scoring engines for small molecule-macromolecule interactions... Support Vector Machines   
References (they are either in the tables or at the end)

附件:
B. O. Villoutreix, N. Renault, D. Lagorce, O. Sperandio, M. Montes and M. A. Miteva
Free Resources to Assist Structure-Based Virtual Ligand Screening Experiments
Review Current Protein and Peptide Science, 2007, 8(4):381-411.
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Originally posted by 2006Jerry at 2008-2-4 22:51:
kankan!

那就再看看:

化学信息学释疑
http://muchong.com/bbs/viewthread.php?tid=220153

关于化学信息学的误解与错误
http://muchong.com/bbs/viewthread.php?tid=469963

化学信息学是谁最先提出来的?
http://muchong.com/bbs/viewthread.php?tid=238233

为什么说化学信息学不是文献检索?
http://muchong.com/bbs/viewthread.php?tid=238892

计算机化学和化学信息学联系和区别
http://www.muchong.com/viewarticle.php?id=237776

关于国内从事计算机化学研究的一些情况
http://www.muchong.com/viewarticle.php?id=237889

关于计算机化学的书籍
http://www.muchong.com/bbs/viewthread.php?tid=237895

计算机辅助有机合成的历史与人物(中国)
http://www.muchong.com/bbs/viewthread.php?tid=369487

计算机辅助有机合成的历史与人物(外国)
http://www.muchong.com/bbs/viewthread.php?tid=369471

[ Last edited by yalefield on 2008-2-4 at 23:29 ]
3楼2008-02-04 23:25:06
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