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linyingjia

至尊木虫 (职业作家)

[交流] windows7 下 用autodock4 生成pdbqt时发生错误 为什么啊 已有1人参与

win7旗舰版  安装cygwin 后  安装autodock4

由pdb生成pdbqt时  提示
File "C:\Python25\Lib\site-packages\lib\site-packages\ViewerFramework\VF.py", line 898, in tryto
    result = command( *args, **kw )
  File "C:\Python25\Lib\site-packages\lib\site-packages\AutoDockTools\autotorsCommands.py", line 3530, in doit
    cleanup=cleanup)
  File "C:\Python25\Lib\site-packages\lib\site-packages\AutoDockTools\autotorsCommands.py", line 292, in initLPO4
    root=root, outputfilename=outputfilename, cleanup=cleanup)
  File "C:\Python25\Lib\site-packages\lib\site-packages\AutoDockTools\MoleculePreparation.py", line 1019, in __init__
    detect_bonds_between_cycles=detect_bonds_between_cycles)
  File "C:\Python25\Lib\site-packages\lib\site-packages\AutoDockTools\MoleculePreparation.py", line 768, in __init__
    delete_single_nonstd_residues=False)
  File "C:\Python25\Lib\site-packages\lib\site-packages\AutoDockTools\MoleculePreparation.py", line 143, in __init__
    self.addCharges(mol, charges_to_add)
  File "C:\Python25\Lib\site-packages\lib\site-packages\AutoDockTools\MoleculePreparation.py", line 215, in addCharges
    mol.chains.residues.atoms))
  File "C:\Python25\Lib\site-packages\lib\site-packages\AutoDockTools\MoleculePreparation.py", line 214, in <lambda>
    len_zero_charges = len(filter(lambda x: x.charge==0,
  File "C:\Python25\Lib\site-packages\lib\site-packages\MolKit\molecule.py", line 407, in __getattr__
    return self._charges[self.chargeSet]
KeyError: None

这是什么原因啊
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longytu

捐助贵宾 (正式写手)


★
小木虫: 金币+0.5, 给个红包,谢谢回帖
1:建议换个Mgtools版本,如1.5.6,无需安装cywin
2:换个系统版本,用linux,简单方便,没这么多乱七八槽让人纠结的问题
2楼2013-07-11 10:05:32
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linyingjia

至尊木虫 (职业作家)

引用回帖:
2楼: Originally posted by longytu at 2013-07-11 10:05:32
1:建议换个Mgtools版本,如1.5.6,无需安装cywin
2:换个系统版本,用linux,简单方便,没这么多乱七八槽让人纠结的问题

试试看
3楼2013-07-11 12:49:36
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