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mouwat

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souledge

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franch: ½ð±Ò+2, ר¼Ò¿¼ºË, лл»ØÌû½»Á÷ 2012-09-24 12:57:28
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The error info can be found at the end of xxx.log file if you ran Abinit with command: abinit < xxx.files >& xxx.log, otherwise, it displays in your terminal.
I am not sure which kind of "error" you met, or what means "cannot calculate". By guessing, displacements of ion(s) broke the symmetry, thus the convergence of response function may become more difficult.
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2Â¥2012-09-23 00:16:06
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souledge

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???????:
3?: Originally posted by mouwat at 2012-09-23 00:42:40
???w??????  ?x?x????N??

sorry?????o?????Y??

err files:
mpiexec: Warning: tasks 2,4-15 exited with status 1.

tnlo_2????????á´??r???????????

input files??????
xred         ...

Actually, the error info you provided was not really the proper one, since it was just a stop signal from MPI code, instead of that from Abinit.
Why don't you attach your full log or output file here? You can edit your first post and upload the file as accessory.
Further, you may download my tutorial about Abinit from the ??????? broad. That will give you some idea for finding error info from Abinit.
?????????¦Ä???????????????????????MPI??????????????????Abinit???
??????log???????????????????????¦²?????????????????????????
????????????????????????????Abinit??????????????¦Â???Abinit??????????
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4Â¥2012-09-23 10:11:45
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souledge

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mouwat: »ØÌûÖö¥ 2012-09-25 06:59:03
ÒýÓûØÌû:
5Â¥: Originally posted by mouwat at 2012-09-23 11:04:38
¸½ÉÏlog™n
http://www.putlocker.com/file/507AF85E4CF0552D

¸ÐÖx...

I have checked it, the error info was as:
ÒýÓûØÌû:
p15_14241:  p4_error: interrupt SIGSEGV: 11
rm_l_15_14245: (13.175781) net_send: could not write to fd=5, errno = 32
p1_10669:  p4_error: net_recv read:  probable EOF on socket: 1
p2_10670:  p4_error: net_recv read:  probable EOF on socket: 1
p4_25239:  p4_error: net_recv read:  probable EOF on socket: 1
p6_25241:  p4_error: net_recv read:  probable EOF on socket: 1
p5_25240:  p4_error: net_recv read:  probable EOF on socket: 1
p7_25242:  p4_error: net_recv read:  probable EOF on socket: 1

Therefore, I wanna ask a question, which version of MPI you are using now, MPICH1? Since I can just find p4_error from MPICH1 or P4 but not from modern MPICH2 and OpenMPI. Would you like to take a look at your mpi version by : mpiexec -info ?
Of course, some person reported that p4_error may be caused by network problem among nodes, I am not sure whether you are using cluster or workstation (16 cores Xeon platform could be multi-CPU workstation). But if you were using the later one, it does not make sense to discuss about network problem.
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6Â¥2012-09-23 13:19:33
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souledge

ר¼Ò¹ËÎÊ (ÖøÃûдÊÖ)

¡ï ¡ï
franch: ½ð±Ò+2, лл»ØÌû½»Á÷ 2012-09-25 10:02:27
franch: ר¼Ò¿¼ºË 2012-09-25 10:02:35
???????:
7?: Originally posted by mouwat at 2012-09-23 14:22:34
???????š}?I??????^?????§Ñ???r????????\??  ?????????????????
???????f?W¡¤???????f?^abinit???@???????????????}
?????o???B?j????  ?????@?Y?????????P????o???ùz???P
????????????? ...

It could be an Abinit problem, even though I still think it is higher possible raised from the old version of MPI.
If you wanna calculate the 3rd-order deviation of energy ( anharmonic phonon), why not giving a try to Quantum-ESPRESSO? It is normally stable for response function issues.
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8Â¥2012-09-23 22:25:19
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oxox6085

ר¼Ò¹ËÎÊ (ÕýʽдÊÖ)

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franch: ½ð±Ò+2, лл»ØÌû½»Á÷ 2012-09-24 12:59:43
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9Â¥2012-09-24 00:03:38
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mouwat

Ìú³æ (³õÈëÎÄ̳)

???????:
2?: Originally posted by souledge at 2012-09-23 00:16:06
??????????????????????????????????????
The error info can be found at the end of xxx.log file if you ran Abinit with command: abinit < xxx.files >& xxx.log, otherwise, it display ...

???w??????  ?x?x????N??

sorry?????o?????Y??

err files:
mpiexec: Warning: tasks 2,4-15 exited with status 1.

tnlo_2????????á´??r???????????

input files??????
xred        0.33333 0.66667  0.5
               0.66667 0.33333  0.5
to
xred        0.33333 0.66667  0.5026208779
               0.66667 0.33333  0.4973791221
3Â¥2012-09-23 00:42:40
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

mouwat

Ìú³æ (³õÈëÎÄ̳)

ÒýÓûØÌû:
4Â¥: Originally posted by souledge at 2012-09-23 10:11:45
Actually, the error info you provided was not really the proper one, since it was just a stop signal from MPI code, instead of that from Abinit.
Why don't you attach your full log or output file he ...

¸½ÉÏlog™n
http://www.putlocker.com/file/507AF85E4CF0552D

¸ÐÖx
5Â¥2012-09-23 11:04:38
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

mouwat

Ìú³æ (³õÈëÎÄ̳)

???????:
6?: Originally posted by souledge at 2012-09-23 13:19:33
I have checked it, the error info was as:

Therefore, I wanna ask a question, which version of MPI you are using now, MPICH1? Since I can just find p4_error from MPICH1 or P4 but not from modern M ...

???????š}?I??????^?????§Ñ???r????????\??  ?????????????????
???????f?W¡¤???????f?^abinit???@???????????????}
?????o???B?j????  ?????@?Y?????????P????o???ùz???P
?????????????  ???????????????????á´????????????????á´??????  ????s???????á´??r??o?????....
7Â¥2012-09-23 14:22:34
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

mouwat

Ìú³æ (³õÈëÎÄ̳)

???????:
6?: Originally posted by souledge at 2012-09-23 13:19:33
I have checked it, the error info was as:

Therefore, I wanna ask a question, which version of MPI you are using now, MPICH1? Since I can just find p4_error from MPICH1 or P4 but not from modern M ...

?x?x????V??some person reported that p4_error may be caused by network problem among nodes?@??,???????????????CPU????]????????}??
10Â¥2012-09-25 06:54:55
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû
Ïà¹Ø°æ¿éÌø×ª ÎÒÒª¶©ÔÄÂ¥Ö÷ mouwat µÄÖ÷Ìâ¸üÐÂ
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