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Jfreda

铁虫 (小有名气)

[求助] 能量优化时出错

大家好,我在对体系进行能量优化时,老是出现如下的错误:
Steepest Descents:
   Tolerance (Fmax)   =  1.00000e+02
   Number of steps    =        10000
Stepsize too small, or no change in energy.
Converged to machine precision,
but not to the requested precision Fmax < 100
Double precision normally gives you higher accuracy.
writing lowest energy coordinates.
Steepest Descents converged to machine precision in 618 steps,
but did not reach the requested Fmax < 100.
Potential Energy  = -3.6909910e+06
Maximum force     =  3.1073354e+04 on atom 25609
Norm of force     =  2.0544344e+02
改变em.mdp中的参数emtol,emstep,dt结果还是一样,初始结构检查了也没有错。
我现在用的是oplsaa立场,其中的ffoplsaabon.itp, ffoplsaanb.itp文件时我从网上当下来的,有关于磷脂的部分,上述的结果会不会跟这些参数文件的设置有关呢,请大家帮忙分析一下,谢谢!
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冯慧敏

银虫 (小有名气)

【答案】应助回帖

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御剑江湖(金币+3): 谢谢 2011-05-25 09:04:20
Jfreda(金币+10): 2011-05-27 09:55:34
一种可能是你的初始构象很不错,不需要进行能量优化,所以做最小化的时候总是提示能量没有改变。你可以尝试一下直接跑动力学,如果跑的通的话,就是这个原因了
3楼2011-05-25 08:56:23
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