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huangpu2009

铁虫 (小有名气)

[求助] Siesta 3.1编译出错,按照张老师的视频进行的,麻烦大家帮帮忙,谢谢。

刚开始学,按照老师的视频编译时,
最后报错,cannot find -lmkl_solver
看了下lib文件夹下面,好像没这个文件呀,我用的是intel_parallel_xe_2013版的。
求教一下,谢谢~~~~
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love5264

木虫 (正式写手)

【答案】应助回帖


感谢参与,应助指数 +1
huangpu2009: 金币+1, ★★★很有帮助, 非常感谢,明白了。 2013-04-03 12:41:41
这个不影响,现在新版MKL有变化。
#MKL
MKLPATH=/opt/intel/composer_xe_2013.1.117/mkl/lib/intel64  #自己修改
SUGGESTED_LIBS=$(MKLPATH)/libmkl_scalapack_lp64.a \
               -Wl,--start-group \
                  $(MKLPATH)/libmkl_intel_lp64.a \
                  $(MKLPATH)/libmkl_sequential.a \
                  $(MKLPATH)/libmkl_core.a \
                  $(MKLPATH)/libmkl_blacs_openmpi_lp64.a \
               -Wl,--end-group \
               -lpthread -lm
谋定而动
4楼2013-04-02 23:16:48
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guohuazhong

至尊木虫 (职业作家)

【答案】应助回帖

★ ★ ★
感谢参与,应助指数 +1
fzx2008: 金币+2, 谢谢回帖! 2013-04-02 22:17:51
huangpu2009: 金币+1, 有帮助, 谢谢,我再试一下。 2013-04-03 12:42:05
#
# This file is part of the SIESTA package.
#
# Copyright (c) Fundacion General Universidad Autonoma de Madrid:
# E.Artacho, J.Gale, A.Garcia, J.Junquera, P.Ordejon, D.Sanchez-Portal
# and J.M.Soler, 1996- .
#
# Use of this software constitutes agreement with the full conditions
# given in the SIESTA license, as signed by all legitimate users.
#
.SUFFIXES:
.SUFFIXES: .f .F .o .a .f90 .F90

SIESTA_ARCH=x86_64-unknown-linux-gnu--unknown

FPP=
FPP_OUTPUT=
FC=mpif90
RANLIB=ranlib

SYS=nag

SP_KIND=4
DP_KIND=8
KINDS=$(SP_KIND) $(DP_KIND)

FFLAGS=-g -O2
FPPFLAGS=-DMPI -DFC_HAVE_FLUSH -DFC_HAVE_ABORT
LDFLAGS=

FFLAGS_DEBUG= -g -O2    # whatever options you might need,guohuazhong
DUMMY_FOX= --enable-dummy # whatever options you might need,guohuazhong

ARFLAGS_EXTRA=

FCFLAGS_fixed_f=
FCFLAGS_free_f90=
FPPFLAGS_fixed_F=
FPPFLAGS_free_F90=

#BLAS_LIBS=libblas.a
#LAPACK_LIBS=dc_lapack.a liblapack.a
#BLACS_LIBS=
#SCALAPACK_LIBS=

######BLAS_LIBS=-L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -lmkl_intel_lp64 -lmkl_sequential -lmkl_lapack -lmkl_core -lguide -pthread
######LAPACK_LIBS=-L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -lmkl_sequential -lmkl_core -pthread
######BLACS_LIBS=-L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -lmkl_blacs_openmpi_lp64 -pthread
######SCALAPACK_LIBS=-L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -lmkl_scalapack_lp64 -pthread

#######################SCA=-L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -lmkl_blacs_intelmpi_lp64 -lmkl_scalapack_lp64
SCA=${MKLPATH}/libmkl_scalapack_lp64.a ${MKLPATH}/libmkl_solver_lp64_sequential.a -Wl,--start-group ${MKLPATH}/libmkl_intel_lp64.a ${MKLPATH}/libmkl_sequential.a ${MKLPATH}/libmkl_core.a ${MKLPATH}/libmkl_blacs_openmpi_lp64.a -Wl,--end-group -lpthread
      
#################BLAS=-L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -lmkl_intel_lp64 -lmkl_blas95_lp64 -lmkl_sequential -lmkl_lapack95_lp64 -lmkl_core #-lguide -pthread
################LAPACK=-L/opt/intel/Compiler/11.1/059/mkl/lib/em64t -lmkl_sequential -lmkl_lapack95_lp64 -lmkl_core #-pthread -lguide

MKLINCLUDE=/opt/intel/Compiler/11.1/059/mkl/include
MKLPATH=/opt/intel/Compiler/11.1/059/mkl/lib/em64t
BLAS_LIBS=-L${MKLPATH} -I${MKLINCLUDE} -I${MKLINCLUDE}/em64t/lp64 -lmkl_blas95_lp64 -Wl,--start-group ${MKLPATH}/libmkl_intel_lp64.a ${MKLPATH}/libmkl_sequential.a ${MKLPATH}/libmkl_core.a -Wl,--end-group -lpthread
LAPACK_LIBS=-L${MKLPATH} -I${MKLINCLUDE} -I${MKLINCLUDE}/em64t/lp64 -lmkl_lapack95_lp64 -Wl,--start-group ${MKLPATH}/libmkl_intel_lp64.a ${MKLPATH}/libmkl_sequential.a ${MKLPATH}/libmkl_core.a -Wl,--end-group -lpthread

#COMP_LIBS=dc_lapack.a liblapack.a libblas.a

NETCDF_LIBS=
NETCDF_INTERFACE=

LIBS=$(SCALAPACK_LIBS) $(BLACS_LIBS) $(LAPACK_LIBS) $(BLAS_LIBS) $(NETCDF_LIBS) $(SCA)

#SIESTA needs an F90 interface to MPI
#This will give you SIESTA's own implementation
#If your compiler vendor offers an alternative, you may change
#to it here.
MPI_INTERFACE=libmpi_f90.a
MPI_INCLUDE=/opt/openmpi-1.6.3/include
#Dependency rules are created by autoconf according to whether
#discrete preprocessing is necessary or not.
.F.o:
        $(FC) -c $(FFLAGS) $(INCFLAGS) $(FPPFLAGS) $(FPPFLAGS_fixed_F)  $<
.F90.o:
        $(FC) -c $(FFLAGS) $(INCFLAGS) $(FPPFLAGS) $(FPPFLAGS_free_F90) $<
.f.o:
        $(FC) -c $(FFLAGS) $(INCFLAGS) $(FCFLAGS_fixed_f)  $<
.f90.o:
        $(FC) -c $(FFLAGS) $(INCFLAGS) $(FCFLAGS_free_f90)  $<

用上面给你arch.make,我想基本上可以编译通过了,只要你用的是intel的编译器,当然得修改相应的库,我用的是intel 11.1.059版本。

» 本帖已获得的红花(最新10朵)

2楼2013-04-02 21:49:52
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huangpu2009

铁虫 (小有名气)

引用回帖:
2楼: Originally posted by guohuazhong at 2013-04-02 21:49:52
#
# This file is part of the SIESTA package.
#
# Copyright (c) Fundacion General Universidad Autonoma de Madrid:
# E.Artacho, J.Gale, A.Garcia, J.Junquera, P.Ordejon, D.Sanchez-Portal
# and J.M ...

谢谢,我是按着张老师的视频教程做的,就里面的一个-lmkl_solver没有,在lib文件夹下没找着这个文件,其他的好像都正常,我把这个去掉后,可以编译过去,但不知道最后生成的Siesta程序是不是完整。
3楼2013-04-02 21:57:29
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ouyangyulou

银虫 (小有名气)

送红花一朵
引用回帖:
2楼: Originally posted by guohuazhong at 2013-04-02 21:49:52
#
# This file is part of the SIESTA package.
#
# Copyright (c) Fundacion General Universidad Autonoma de Madrid:
# E.Artacho, J.Gale, A.Garcia, J.Junquera, P.Ordejon, D.Sanchez-Portal
# and J.M ...

前辈,你是个好人,按照你给的那个arch.make  我的终于弄好了。谢谢,谢谢。好人好报
创新、思路决定出路
5楼2015-02-07 21:53:23
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