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yangfan19861226

至尊木虫 (著名写手)

[求助] 晶体小白,求助一些A,B,C类错误

小弟非晶体专业,2110年解了个有机物的晶体(作为化合物结构的辅助鉴定),在check cif时发现不少A,B,C类错误,现在要发文章,不知道这些错误影响发文章不(不发晶体类的杂志,而且晶体仅作为化合物结构的佐证)?

如果影响发文章的话,如何修?

谢谢各位了!

Alert level A
SHFSU01_ALERT_2_A  The absolute value of parameter shift to su ratio > 0.20
            Absolute value of the parameter shift to su ratio given   0.235
            Additional refinement cycles may be required.
PLAT029_ALERT_3_A _diffrn_measured_fraction_theta_full Low .......       0.83      
PLAT080_ALERT_2_A Maximum Shift/Error ............................       0.23      
PLAT213_ALERT_2_A Atom C37             has ADP max/min Ratio .....       5.10 prola
PLAT602_ALERT_2_A VERY LARGE Solvent Accessible VOID(S) in Structure        !
PLAT043_ALERT_1_A Check Reported Molecular Weight ................     592.91      
PLAT051_ALERT_1_A Mu(calc) and Mu(CIF) Ratio Differs from 1.0 by .      65.64 Perc.
PLAT052_ALERT_1_A (Proper) Absorption Correction Method Missing ..          ?
PLAT053_ALERT_1_A Minimum Crystal Dimension Missing (or Error) ...          ?
PLAT054_ALERT_1_A Medium  Crystal Dimension Missing (or Error) ...          ?
PLAT055_ALERT_1_A Maximum Crystal Dimension Missing (or Error) ...          ?
PLAT078_ALERT_1_A No H-atoms, but _solution_hydrogens reported as        geom     
PLAT079_ALERT_1_A No H-atoms, but _hydrogen_treatment reported as       mixed     
PLAT122_ALERT_1_A No _symmetry_space_group_name_H-M Given ........          ?

Alert level B
RFACR01_ALERT_3_B  The value of the weighted R factor is > 0.35
            Weighted R factor given   0.362
PLAT026_ALERT_3_B Ratio Observed / Unique Reflections too Low ....         34 Perc.
PLAT084_ALERT_2_B High R2 Value ..................................       0.36      
PLAT201_ALERT_2_B Isotropic non-H Atoms in Main Residue(s) .......          8      
PLAT326_ALERT_2_B Check for Possibly Missing H on sp3? Carbon ....         C2     
PLAT326_ALERT_2_B Check for Possibly Missing H on sp3? Carbon ....        C17     
PLAT326_ALERT_2_B Check for Possibly Missing H on sp3? Carbon ....        C47     
PLAT326_ALERT_2_B Check for Possibly Missing H on sp3? Carbon ....        C61     
PLAT326_ALERT_2_B Check for Possibly Missing H on sp3? Carbon ....        C64     
PLAT326_ALERT_2_B Check for Possibly Missing H on sp3? Carbon ....        C67     
PLAT326_ALERT_2_B Check for Possibly Missing H on sp3? Carbon ....        C70     
PLAT327_ALERT_2_B Check for Possibly Missing H on sp3? Carbon ....        C73     
PLAT340_ALERT_3_B Low Bond Precision on  C-C Bonds (x 1000) Ang ..         19      
PLAT049_ALERT_1_B Calculated Density less than 1.0 gcm-3 .........       0.86      

Alert level C
RFACG01_ALERT_3_C  The value of the R factor is > 0.10
            R factor given   0.148
STRVA01_ALERT_4_C           Flack test results are ambiguous.
           From the CIF: _refine_ls_abs_structure_Flack    0.690
           From the CIF: _refine_ls_abs_structure_Flack_su    0.160
PLAT082_ALERT_2_C High R1 Value ..................................       0.15      
PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density ....       2.19      
PLAT213_ALERT_2_C Atom C25             has ADP max/min Ratio .....       3.60 prola
PLAT213_ALERT_2_C Atom C34             has ADP max/min Ratio .....       3.40 prola
PLAT213_ALERT_2_C Atom C61             has ADP max/min Ratio .....       3.50 prola
PLAT220_ALERT_2_C Large Non-Solvent    C     Ueq(max)/Ueq(min) ...       3.33 Ratio
PLAT230_ALERT_2_C Hirshfeld Test Diff for    C4     --  C5      ..       5.39 su   
PLAT230_ALERT_2_C Hirshfeld Test Diff for    C14    --  C15     ..       5.08 su   
PLAT230_ALERT_2_C Hirshfeld Test Diff for    C22    --  C25     ..       5.03 su   
PLAT230_ALERT_2_C Hirshfeld Test Diff for    C36    --  C37     ..       5.09 su   
PLAT230_ALERT_2_C Hirshfeld Test Diff for    C40    --  C41     ..       5.64 su   
PLAT241_ALERT_2_C Check High      Ueq as Compared to Neighbors for         N6     
PLAT241_ALERT_2_C Check High      Ueq as Compared to Neighbors for        C31     
PLAT241_ALERT_2_C Check High      Ueq as Compared to Neighbors for        C41     
PLAT241_ALERT_2_C Check High      Ueq as Compared to Neighbors for        C59     
PLAT242_ALERT_2_C Check Low       Ueq as Compared to Neighbors for        C32     
PLAT242_ALERT_2_C Check Low       Ueq as Compared to Neighbors for        C40     
PLAT242_ALERT_2_C Check Low       Ueq as Compared to Neighbors for        C58     
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor ....       2.54      
PLAT432_ALERT_2_C Short Inter X...Y Contact  N7     ..  C73     ..       3.01 Ang.
PLAT033_ALERT_4_C Flack x Parameter Value Deviates from Zero .....       0.69      
PLAT040_ALERT_1_C No H-atoms in this Carbon Containing Compound ..          ?
PLAT041_ALERT_1_C Calc. and Reported SumFormula    Strings  Differ          ?
PLAT045_ALERT_1_C Calculated and Reported Z Differ by ............       0.29 Ratio
PLAT068_ALERT_1_C Reported F000 Differs from Calcd (or Missing)...          ?
PLAT120_ALERT_1_C Reported SPGR ?       Inconsistent with Explicit      P21        
PLAT194_ALERT_1_C Missing _cell_measurement_reflns_used datum ....          ?
PLAT195_ALERT_1_C Missing _cell_measurement_theta_max   datum ....          ?
PLAT196_ALERT_1_C Missing _cell_measurement_theta_min   datum ....          ?
PLAT234_ALERT_4_C Large Hirshfeld Difference N1     --  C1      ..       0.17 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference N1     --  C3      ..       0.16 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference N6     --  C32     ..       0.18 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference N6     --  C33     ..       0.18 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference N7     --  C46     ..       0.17 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference N7     --  C47     ..       0.18 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C2     --  C61     ..       0.19 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C4     --  C9      ..       0.19 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C6     --  C7      ..       0.18 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C19    --  C20     ..       0.18 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C19    --  C24     ..       0.18 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C21    --  C22     ..       0.19 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C23    --  C24     ..       0.17 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C25    --  C26     ..       0.19 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C27    --  C28     ..       0.19 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C31    --  C32     ..       0.19 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C34    --  C39     ..       0.24 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C41    --  C42     ..       0.17 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C42    --  C43     ..       0.20 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C49    --  C50     ..       0.16 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C50    --  C51     ..       0.17 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C55    --  C60     ..       0.22 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C59    --  C60     ..       0.17 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C61    --  C62     ..       0.17 Ang.
PLAT234_ALERT_4_C Large Hirshfeld Difference C67    --  C69     ..       0.25 Ang.
PLAT244_ALERT_4_C Low   ’Solvent’ Ueq as Compared to Neighbors of         C73
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yangfan19861226

至尊木虫 (著名写手)

2楼2013-03-12 10:24:19
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