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xuyanglei

½ð³æ (СÓÐÃûÆø)

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ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

yangleixu

½ð³æ (СÓÐÃûÆø)

¡ï
lijunjie84: , Õâ¸ö¾àÀëÌ«¶Ì£¬É¾ÁËÖØ¶¨£¡ 2012-05-18 19:01:29
lijunjie84: ½ð±Ò+1 2012-05-18 19:01:36
PLAT430

--------------------------------------------------------------------------------
PLAT430 Type_2 Test for short non-bonding inter D...A contacts
--------------------------------------------------------------------------------

This test alerts for possibly missed Hydrogen bonds as indicated by short
(i.e. shorter than sum of the van der Waals radii - 0.2 Angstrom)
Donor - Acceptor distances.
Note: Short C=O .. O=C are observed sometimes when part of three-centre
O-H, N-H or C-H O..O bridging.  

Ôõô¸ÄÄØ ÇóÖú
2Â¥2012-05-18 17:15:14
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

xuyanglei

½ð³æ (СÓÐÃûÆø)

PLAT306

--------------------------------------------------------------------------------
PLAT306 Type_2 Test for isolated Oxygen Atoms
--------------------------------------------------------------------------------

This test reports on oxygen atoms that are not within bonding distance to
any other atom in the structure. A common reason may be that no hydrogen
atoms are given for a water molecule. Attempts should be made to locate
those hydrogen atoms from a difference map.

Ôõô¸ÄÄØ
3Â¥2012-05-18 17:21:06
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

xuyanglei

½ð³æ (СÓÐÃûÆø)

PLAT306

--------------------------------------------------------------------------------
PLAT306 Type_2 Test for isolated Oxygen Atoms
--------------------------------------------------------------------------------

This test reports on oxygen atoms that are not within bonding distance to
any other atom in the structure. A common reason may be that no hydrogen
atoms are given for a water molecule. Attempts should be made to locate
those hydrogen atoms from a difference map.

Ôõô¸ÄÄØ
4Â¥2012-05-18 17:21:21
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

xuyanglei

½ð³æ (СÓÐÃûÆø)

ËÍÏÊ»¨Ò»¶ä
PLAT306

--------------------------------------------------------------------------------
PLAT306 Type_2 Test for isolated Oxygen Atoms
--------------------------------------------------------------------------------

This test reports on oxygen atoms that are not within bonding distance to
any other atom in the structure. A common reason may be that no hydrogen
atoms are given for a water molecule. Attempts should be made to locate
those hydrogen atoms from a difference map.

Ôõô¸ÄÄØ
5Â¥2012-05-18 17:21:33
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

xuyanglei

½ð³æ (СÓÐÃûÆø)

ÒýÓûØÌû:
2Â¥: Originally posted by yangleixu at 2012-05-18 17:15:14:
PLAT430

--------------------------------------------------------------------------------
PLAT430 Type_2 Test for short non-bonding inter D...A contacts
--------------------------------------- ...

PLAT306

--------------------------------------------------------------------------------
PLAT306 Type_2 Test for isolated Oxygen Atoms
--------------------------------------------------------------------------------

This test reports on oxygen atoms that are not within bonding distance to
any other atom in the structure. A common reason may be that no hydrogen
atoms are given for a water molecule. Attempts should be made to locate
those hydrogen atoms from a difference map.

Ôõô¸ÄÄØ
6Â¥2012-05-18 17:21:58
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

xuyanglei

½ð³æ (СÓÐÃûÆø)

ÒýÓûØÌû:
2Â¥: Originally posted by yangleixu at 2012-05-18 17:15:14:
PLAT430

--------------------------------------------------------------------------------
PLAT430 Type_2 Test for short non-bonding inter D...A contacts
--------------------------------------- ...

PLAT306

--------------------------------------------------------------------------------
PLAT306 Type_2 Test for isolated Oxygen Atoms
--------------------------------------------------------------------------------

This test reports on oxygen atoms that are not within bonding distance to
any other atom in the structure. A common reason may be that no hydrogen
atoms are given for a water molecule. Attempts should be made to locate
those hydrogen atoms from a difference map.

Ôõô¸ÄÄØ
7Â¥2012-05-18 17:22:11
ÒÑÔÄ   »Ø¸´´ËÂ¥   ¹Ø×¢TA ¸øTA·¢ÏûÏ¢ ËÍTAºì»¨ TAµÄ»ØÌû

sdujjt

ľ³æ (ÕýʽдÊÖ)

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