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小木虫论坛-学术科研互动平台 » 生物医药区 » 生物科学 » how to use Mira to assemble Genomes?
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木星海

金虫 (正式写手)

[求助] how to use Mira to assemble Genomes?

First sorry for writing English, because the computer in the University only has English and I don't know how to install Chinese in Unix System.

My task today is learning how to assemble Genomes with MIRA.
I read some files, but there are many complex information and commands?
Can somebody give me a favor about this? How to run the MIRA with command line in Unix Operating system?

Thank you very much!
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1楼 2011-12-21 21:10:23
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gaoyang636

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【答案】应助回帖

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silicare(金币+3, BioEPI+1): http://emuch.net/bbs/viewthread.php?tid=3973721 2011-12-22 17:10:56
木星海(金币+5): 2011-12-22 18:34:51
which kind of seq data do you wanna assemble? 454,solexa,ion Torrent..?
I see MIRA said it's a Swiss knife~
and u can download the manual via this link http://mira-assembler.sourceforg ... tiveGuideToMIRA.pdf
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2楼2011-12-22 09:34:39
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木星海

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引用回帖:
楼: Originally posted by gaoyang636 at 2011-12-22 09:34:39:
which kind of seq data do you wanna assemble? 454,solexa,ion Torrent..?
I see MIRA said it's a Swiss knife~
and u can download the manual via this link [url]http://mira-assembler.sourceforge.net/ ...

thank you! The problem was solved yesterday°°
Actually I had the manual, it was too long to read.
I thought, asking somebody here was maybe a quicker way.

Anyway, thanks very much°
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3楼2011-12-22 18:34:08
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gaoyang636

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引用回帖:
3楼: Originally posted by 木星海 at 2011-12-22 18:34:08:
thank you! The problem was solved yesterday°°
Actually I had the manual, it was too long to read.
I thought, asking somebody here was maybe a quicker way.

Anyway, thanks very much°

Actually,didn't do much help~ If U confused by the command line, no need to be depressed. Every beginner  face this, just check with the manual when you're going to run the tool.Don't bother to memorize~
  Wish u good luck~
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4楼2011-12-23 08:56:43
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木星海

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引用回帖:
楼: Originally posted by gaoyang636 at 2011-12-23 08:56:43:
Actually,didn't do much help~ If U confused by the command line, no need to be depressed. Every beginner  face this, just check with the manual when you're going to run the tool.Don't bother to me ...

好咧 谢谢哈 哈哈 还是说中文得劲
现在已经不怕command line了 一开始的时候完全不知道是咋回事
我没有信息学背景 本来是生化 所长鼓励大家不要这么年轻把路定的这么窄 希望大家多涉猎不同领域的东西 所以我这学期才选了这个生物信息学module
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5楼2011-12-23 09:06:47
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