24小时热门版块排行榜    

查看: 5240  |  回复: 19
当前只显示满足指定条件的回帖,点击这里查看本话题的所有回帖

feiye2214

木虫 (正式写手)

[求助] 向genbank提交序列之后,收到一信件,需要提供有关样品的信息?有人遇到过么?救赎


小弟前天向genbank提交了一个cDNA全序列,今天收到回信,需要再提供一些信息,我第一次提交序列,各位大侠帮忙看看,到底是要什么东西?
难道是:样品采集的地点,采集方式?获得cDNA的方式和方法?跑胶照片?
求救赎!下面是信件的内容,照片也是
Dear GenBank Submitter:

Please find your assigned Accession Number(s) in the letter below.

Please provide a strain, isolate, clone, specimen voucher, OR an
alpha-numeric code used in your laboratory to distinguish your
submission(s) from others in the database. Note we are requesting
that you provide only one of these identifiers, if available.

For more information, please see:
http://www.ncbi.nlm.nih.gov/books/NBK53701/

Send this information to: gb-admin@ncbi.nlm.nih.gov

Thank you and we look forward to hearing from you soon.

Sincerely,

The GenBank Submissions Staff
Bethesda, Maryland USA
回复此楼
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

常用金属盐

木虫 (小有名气)

引用回帖:
2楼: Originally posted by zemin_fang at 2011-08-10 11:23:13
主要是提供你递交的序列原始来源菌株的名称,如果是克隆,给你的克隆起个名字,以保证你的序列名称在genbank'中是唯一的。

你好:
     阅读你之前的帖子,感觉你在微生物方面很专业,所以想请教个问题。我向NCBI提交序列后,也收到了一封关于样品信息的回信,由于我第一次弄不太懂,能否麻烦你帮忙看一下吗!谢谢!以下是genbank的回信:
[1] Is this sequence from:

  a) a purified culture that contains only one microbial species or a vouchered specimen

  b) enrichment culture: use of selective culture media to enrich for a set
     of microorganisms with a particular phenotypic property, resulting in
     a partially purified, mixed culture. Do not choose this option
     for a purified strain or vouchered specimen.                           

  c) bulk environmental DNA (no cultures or other vouchers available):
     PCR-amplified directly from source/host DNA.

   If this is from bulk environmental DNA, was it amplified using:
          i) universal primers - amplifies DNA from a broad range of organisms
          or
          ii) species-specific primers - amplifies DNA from a single species
         
[2] Provide a clone/isolate/strain/specimen voucher or other unique identifier
for your record, using accepted biorepository acronyms where possible.  

[3] Provide additional details describing the environmental conditions and
geographic location where this sequence or organism was isolated.

Send your response to:  gb-admin@ncbi.nlm.nih.gov

If we do not hear from you by Jul  1, 2015, all of your submission(s) will
be deleted from the processing queue.

For your reference, please find your preliminary flatfile below
with the information we currently have.
17楼2015-06-22 22:07:21
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖
查看全部 20 个回答

zemin_fang

木虫 (正式写手)

【答案】应助回帖


silicare(金币+1): 谢谢参与 2011-08-10 11:52:53
feiye2214(金币+5): 2011-08-10 12:05:37
主要是提供你递交的序列原始来源菌株的名称,如果是克隆,给你的克隆起个名字,以保证你的序列名称在genbank'中是唯一的。
2楼2011-08-10 11:23:13
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

feiye2214

木虫 (正式写手)

引用回帖:
2楼: Originally posted by zemin_fang at 2011-08-10 11:23:13:
主要是提供你递交的序列原始来源菌株的名称,如果是克隆,给你的克隆起个名字,以保证你的序列名称在genbank'中是唯一的。

我的是乌贼的mRNA,用试剂盒提取RNA,反转录,5’3’RACE,最后获得的全序列装到pMD 18-T载体转到DH5a菌里了,我是不是给这个DH5a菌取个名字?谢谢
3楼2011-08-10 11:40:15
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

jinkui960

至尊木虫 (知名作家)

★ ★
adslye(金币+2): 感谢交流!祝顺利! 2011-08-10 21:31:32
引用回帖:
3楼: Originally posted by feiye2214 at 2011-08-10 11:40:15:
我的是乌贼的mRNA,用试剂盒提取RNA,反转录,5’3’RACE,最后获得的全序列装到pMD 18-T载体转到DH5a菌里了,我是不是给这个DH5a菌取个名字?谢谢

你的序列是从乌贼里面扩增得到的,跟DH5a菌没有关系,DH5a只是一个宿主菌,你可以提供乌贼的样品编号,实在没有编号,可以自己编一个试验样品号。

» 本帖已获得的红花(最新10朵)

4楼2011-08-10 12:33:33
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖
最具人气热帖推荐 [查看全部] 作者 回/看 最后发表
[基金申请] 什么时候开奖? +8 CrisMessi 2026-08-18 9/450 2026-08-23 10:49 by 旋风马1987
[硕博家园] 售SCI一区T0P文章,我:8.O55.1.O.54,科目全,可十急 +3 2JOx3r2CYEgw 2026-08-21 9/450 2026-08-23 10:44 by IXZuIJ2Q7OVy
[基金申请] 让我中一个面上吧! +12 大萍1987 2026-08-20 14/700 2026-08-23 10:30 by wrm
[基金申请] 今天放榜吗? +15 布布和一二 2026-08-19 16/800 2026-08-23 09:55 by 张春生
[博后之家] 售SCI一区T0P文章,我:8.O.55.1.O54,科目全,可伽急 +3 DpSrDtM079iu 2026-08-22 5/250 2026-08-23 04:07 by OEbVnUOu01ol
[论文投稿] 售SCI一区T0P文章,我:8O.55.1.O.5.4,科目齐全,可+急 +3 2JOx3r2CYEgw 2026-08-22 6/300 2026-08-23 03:40 by OEbVnUOu01ol
[论文投稿] 售SCI一区T0P文章,我:8.O.55.1.O.5.4,科目全,可+急 +3 QTy3jDtz1uLt 2026-08-21 9/450 2026-08-23 03:04 by OEbVnUOu01ol
[考博] 售SCI文章,我:8O.5.5.1O.54,科目全,可十急 +3 DpSrDtM079iu 2026-08-22 3/150 2026-08-23 00:55 by OEbVnUOu01ol
[基金申请] 范进中举一文的中心思想 +3 zjuhero 2026-08-22 4/200 2026-08-22 20:02 by mycsru
[基金申请] 只有每年这种时候来逛逛小木虫 +24 yaoyewhu2008 2026-08-20 26/1300 2026-08-22 17:43 by kammury
[教师之家] 售一区SCI文章T0P,我:8O.551.O54,科目全,可十急 +4 2JOx3r2CYEgw 2026-08-21 4/200 2026-08-22 16:52 by sunzitan
[基金申请] 今天基金会出结果吗?20260819 +16 kkkl_v 2026-08-19 17/850 2026-08-22 16:12 by 阿布Abu
[基金申请] 放榜前的不淡定 40+4 snowwithsea 2026-08-19 14/700 2026-08-21 23:51 by cratir
[基金申请] 建议基金发布提前给出明确的时间点 +10 kulium 2026-08-21 13/650 2026-08-21 21:58 by alongwaytogo
[基金申请] 感觉是下周放榜了 +7 angus9576 2026-08-17 12/600 2026-08-21 13:38 by weiyin
[基金申请] 估计是周四 +3 archvillain 2026-08-18 3/150 2026-08-21 01:48 by jnhyjjm
[基金申请] 时间戳变了,能看出什么问题? +18 基诺咪客 2026-08-17 23/1150 2026-08-20 17:19 by Godzela
[基金申请] 朋友圈看到的 +6 wangzilk 2026-08-18 8/400 2026-08-19 10:55 by Haru815
[基金申请] 明天放榜? +5 Shxjjxjkx 2026-08-18 5/250 2026-08-18 18:14 by -大大大大大-
[基金申请] 今天维护系统维护 祝所有人 高中 +8 gjjjzhong 2026-08-18 9/450 2026-08-18 13:01 by 家与远方
信息提示
请填处理意见