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haofeiqi

木虫 (正式写手)

[交流] 【求助】晶体学报E 的审稿人给了几条修改意见,不知如何解答,请高手指教!!!

1. The crystal packing of your compound exhibits weak intermolecular
interactions (\p---\p and C---H...N), which have to be discussed.
So I suggest you the following edition of the Abstract:
_publ_section_abstract
;
In the title compound, C~13~H~12~ClN~5~, which is a derivative of
antitumor agent pazopanib, the indazole and pyrimidine fragments
form a dihedral angle of 62.63(5)\%. In the crystal structure,
two molecules related by two-fold rotational symmetry are linked
into dimers through \p...\p interactions between the indazole systems.
Weak intermolecular C---H...N hydrogen bobds assemble  further
these dimers into columns propagated in direction [001].
;


2. In view of the above, you need to arrange
the Table 1 (Selected geometric parameters)
with only one Centroid...Centroid distance, and with definitions of
two centroids, Cg1 and Cg2 for C6-C11 and N4/N5/C9/C10/C12, respectively,
in the Table' Legend (in your case the Cg1...Cg2 distance is 3.720(2) A).  


{{{Use an example from another submission:
loop_
_geom_contact_atom_site_label_1
_geom_contact_atom_site_label_2
_geom_contact_distance
_geom_contact_site_symmetry_1
_geom_contact_site_symmetry_2
_geom_contact_publ_flag
Cg1  Cg2  3.621(7) . 2_667  y

_publ_section_table_legends
;
Table 1. Selected geometric parameters (\%A).
Cg1 and Cg2 are centroids of C19-C24 and N3/N4/C1-C3 respectively.
;   }}}


3. In view of the above, you need to arrange
the Table 2 (Hydrogen-bonding geometry)
with the details of only one weak C13---H13...N2(i) interaction.

{{{Use an example from another submission:
loop_
_geom_hbond_atom_site_label_D
_geom_hbond_atom_site_label_H
_geom_hbond_atom_site_label_A
_geom_hbond_distance_DH
_geom_hbond_distance_HA
_geom_hbond_distance_DA
_geom_hbond_angle_DHA
_geom_hbond_site_symmetry_A
_geom_hbond_publ_flag
# Short contacts
# ===== ========
#   D   H    A  D-H      H...A    D...A     D-H...A  symm     publ
#   -   -    -  ---      -----    -----     -------  ----     ----
   C6 H6A N1 0.97   2.52   3.382(3)  169   1_455    yes


4. In view of the above, you need properly edit the Comment, discussing
weak intermolecular interactions and citing Tables 1 and 2.
In the Comment, you need also cite all papers mentioned in
_related_literature section.

5. In _related_literature section, add one more citation, namely,
Sloan et al. (2008).

6. You need to re-draw Fig. 1 with the atomic displacement ELLIPSOIDS.

7. In CIF, use the following software' lines:

_exptl_absorpt_process_details    'CrystalClear (Rigaku/MSC Inc., 2005)'

_computing_structure_solution     'SHELXS97 (Sheldrick, 2008)'
_computing_structure_refinement   'SHELXL97 (Sheldrick, 2008)'
_computing_molecular_graphics     'Bruker SHELXTL (Bruker, ????)'

and provide the full Reference for (Bruker, ????).
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haofeiqi

木虫 (正式写手)

咋没高手看呐,自己先顶一下。
2楼2010-10-17 12:26:32
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ljmmarise

至尊木虫 (著名写手)


haofeiqi(金币+10):谢谢你。 2010-10-17 13:32:50
wsht212(金币+1):谢谢交流,希望常来! 2010-10-17 18:36:10
编辑帮你修改后了,你按照他的意见复制到cif的相应地方就可以了。

难道你连编辑cif文件都不行吗?
3楼2010-10-17 13:30:43
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haofeiqi

木虫 (正式写手)

帝夫:感谢您的回复~ 2010-10-17 23:50:33
引用回帖:
Originally posted by ljmmarise at 2010-10-17 13:30:43:
编辑帮你修改后了,你按照他的意见复制到cif的相应地方就可以了。

难道你连编辑cif文件都不行吗?

呵呵,小弟会编辑CIF文件,只不过我的cif文件里面没有氢键和分子弱相互作用数据,我问做晶体的老师了,他说没有氢键数据,那么编辑是从哪看到氢键数据和分子的弱相互作用的呢?我该如何添加这些数据呢?

  还有编辑所给的第二个修改意见小弟看不太懂,
2. In view of the above, you need to arrangethe Table 1 (Selected geometric parameters)
with only one Centroid...Centroid distance, and with definitions of
two centroids, Cg1 and Cg2 for C6-C11 and N4/N5/C9/C10/C12, respectively,
in the Table' Legend (in your case the Cg1...Cg2 distance is 3.720(2) A).  


{{{Use an example from another submission:
loop_
_geom_contact_atom_site_label_1
_geom_contact_atom_site_label_2
_geom_contact_distance
_geom_contact_site_symmetry_1
_geom_contact_site_symmetry_2
_geom_contact_publ_flag
Cg1  Cg2  3.621(7) . 2_667  y

_publ_section_table_legends
;
Table 1. Selected geometric parameters (\%A).
Cg1 and Cg2 are centroids of C19-C24 and N3/N4/C1-C3 respectively.
;   }}}


麻烦这位大侠能帮忙具体说一下吗?谢谢!!!!
4楼2010-10-17 13:41:52
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定定当

金虫 (正式写手)


haofeiqi(金币+5):谢谢你! 2010-10-17 14:11:13
wsht212(金币+1):谢谢交流,希望常来! 2010-10-17 18:36:26
编辑.cif文件 复制到指定的地方 请lz再仔细看看编辑的信 先不要着急
5楼2010-10-17 14:05:17
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ljmmarise

至尊木虫 (著名写手)

★ ★
haofeiqi(金币+1):谢谢参与
wsht212(金币+1):谢谢交流,希望常来! 2010-10-17 18:36:39
haofeiqi(金币+10):谢谢你再次相助。 2010-10-17 18:53:25
haofeiqi(金币+8): 2010-11-01 21:23:28
loop_
_geom_contact_atom_site_label_1
_geom_contact_atom_site_label_2
_geom_contact_distance
_geom_contact_site_symmetry_1
_geom_contact_site_symmetry_2
_geom_contact_publ_flag
Cg1  Cg2  3.621(7) . 2_667  y

_publ_section_table_legends
;
Table 1. Selected geometric parameters (\%A).
Cg1 and Cg2 are centroids of C19-C24 and N3/N4/C1-C3 respectively.
;


兄弟,吧这些直接复制到cif文件当中的合适位置即可,你说的那些数据编辑给你列出了了。你要找的话要用platon计算才可以得到一个..llis文件,用记事本打开就在里面可以找到那些数据。
6楼2010-10-17 17:51:02
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haofeiqi(金币+1):谢谢参与
7楼2010-10-17 21:33:48
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haofeiqi

木虫 (正式写手)

引用回帖:
Originally posted by 王会征 at 2010-10-17 21:33:48:

这位大侠 麻烦你给我讲解下啊?
8楼2010-10-17 21:53:33
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