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2.1 ÃÞ»¨ÕáÌǺÏøÐ»ùÒòGhSUSA1µÄ¿Ë¡¼ø¶¨ºÍÐòÁзÖÎö
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       ÒÔ´Ë»ùÒòORFµÄÍÆ¶Ï°±»ùËáÐòÁо­BLAST(http://www.ncbi.nlm.nih.gov/blast)±È¶Ô£¬·¢ÏÖÆäÓë¸ÌéÙÕáÌǺÏøµÄ°±»ùËáÐòÁоßÓÐ×î¸ßͬԴÐÔ£¨87%£©£¬¹Ê½«ÆäÃüÃûΪGhSUSA1¡£GhSUSA1 ORFÈ«³¤2430bp£¬¹²±àÂë809¸ö°±»ùËᣬÓÉÓÚ»ùÒò×éÐòÁеĻñµÃ£¬»ùÒò½á¹¹·ÖÎö£¨http://www.dnastar.com£©¸Ã»ùÒòÓÉ15¸öÍâÏÔ×ÓºÍ14¸öÄÚº¬×Ó×é³É£¬´ÓÄÚº¬×Ó´óСÀ´¿´¸üÀàËÆÓÚµ¥×ÓÒ¶Ö²ÎïµÄÕáÌǺÏø»ùÒò½á¹¹£¬ÍƲâÆäÄÚº¬×Ó¶ÔÆä¹¦ÄÜÓÐÒ»¶¨×÷Óá£
      ¸Ã»ùÒòÓÉÕáÌǺϳɽṹÓòºÍÌÇ»ù×ªÒÆ½á¹¹Óò×é³É£¬ÓÃExpasy pI/Mw³ÌÐò£¨http://us.expasy.org/£©¶ÔGhSUSA1µÄ°±»ùËáÐòÁнøÐÐÁËÒ»¼¶½á¹¹µÄÔ¤²â£¬ÆäÀíÂÛÉϵĵȵçµãΪ5.97£¬·Ö×ÓÁ¿Îª92117.31Da¡£
     Í¨¹ý°ë¶¨Á¿RT-PCR·ÖÎö£¬GhSUSA1»ùÒòÔÚ½µØÃÞ²»Í¬×éÖ¯Æ÷¹ÙÖÐ×é³ÉÐÔ±í´ï£¬ÆäÖÐҶƬºÍÝàÆ¬Öбí´ïÁ¿×îµÍ£¬ÔÚ15dÏËάÖбí´ïÁ¿Ã»ÓÐ0dÅßÖéÖиߡ£¶¨Á¿RT-PCR·ÖÎö¿ª»¨ºó²»Í¬Ê±ÆÚÅßÖé¼°ÏËάÖÐGhSUSA1±í´ïÁ¿£¬·¢ÏÖÏËά·¢Óý²»Í¬Ê±ÆÚ±í´ïÁ¿ÓвîÒ죬ÆðʼÆÚ±í´ïÁ¿¸ßÓÚÉú³¤ÆÚ£¬¿ª»¨ºó25d±í´ïÁ¿¸ßÓÚÆäËûʱÆÚ£¬ÕâÕýÊÇ´ÎÉú±Ú·¢ÓýʱÆÚ¡£Southern blot¼¼Êõ·ÖÎö¸Ã»ùÒòÔÚ½µØÃÞÖдæÔÚ2¸ö¿½±´£¬ÓÉÓÚ½µØÃÞÊÇÒìÔ´Ëı¶Ì壬ËùÒÔÍÆ²âA¡¢DÑÇ×é¸÷´æÔÚÒ»¸ö¿½±´¡£

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2.1  ÃÞ»¨ÕáÌǺÏøÐ»ùÒòGhSUSA1µÄ¿Ë¡¼ø¶¨ºÍÐòÁзÖÎö
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2.1   The  cloning  identification and sequence analysis of cotton sucrose synthase  new genes GhSUSA1
  According to TAIL technology, after three 5 'amplification and two 3' amplified one  5582bp genomic fragment was gained by sequencing , and  2660bp cDNA fragment was gained by RT-PCR amplification  sequencing , which was containing  complete ORF, 5'-UTR and the 3'-UTR.
ÒÔ´Ë»ùÒòORFµÄÍÆ¶Ï°±»ùËáÐòÁо­BLAST(http://www.ncbi.nlm.nih.gov/blast)±È¶Ô£¬·¢ÏÖÆäÓë¸ÌéÙÕáÌǺÏøµÄ°±»ùËáÐòÁоßÓÐ×î¸ßͬԴÐÔ£¨87%£©£¬¹Ê½«ÆäÃüÃûΪGhSUSA1¡£
  Through BLAST (http://www.ncbi.nlm.nih.gov/blast)comparison,it is found that the inferred amino acid sequences from this gene ORF had the highest homology (87%) with citrus sucrose synthase amino acid sequence .Therefore, it was named as GhSUSA1.
GhSUSA1 ORFÈ«³¤2430bp£¬¹²±àÂë809¸ö°±»ùËᣬÓÉÓÚ»ùÒò×éÐòÁеĻñµÃ£¬»ùÒò½á¹¹·ÖÎö£¨http://www.dnastar.com£©¸Ã»ùÒòÓÉ15¸öÍâÏÔ×ÓºÍ14¸öÄÚº¬×Ó×é³É£¬´ÓÄÚº¬×Ó´óСÀ´¿´¸üÀàËÆÓÚµ¥×ÓÒ¶Ö²ÎïµÄÕáÌǺÏø»ùÒò½á¹¹£¬ÍƲâÆäÄÚº¬×Ó¶ÔÆä¹¦ÄÜÓÐÒ»¶¨×÷Óá£
The length of GhSUSA1 ORF  is 2430bp, encoding  809 amino acids.Due to the acquisition of genome sequence, gene structure analysis showed(http://www.dnastar.com)  the gene consisting a composition of 15 exons and 14 introns . From the view of intron size ,it is more similar to the sucrose synthase gene structure of monocotyledons, and speculated  its introns have a certain role in its function.
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2Â¥2010-03-02 12:38:48
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The gene is composed by sucrose synthesis structure domain and glycosyl transferase structure domain .The primary structure predicted of amino acid sequences of  GhSUSA1 was taken with the Expasy pI / Mw program (http://us.expasy.org/) ,which indicated its theoretical isoelectric point was 5.97, a molecular weight was 92117.31Da.
       By semi-quantitative RT-PCR analysis, GhSUSA1 genes were constitutive expressed in different tissues of upland cotton , in which  expression number in leaves and sepals was the lowest while expression number in the 15d fibers was less than that of in  0d ovules. Quantitative RT-PCR analysis to GhSUSA1 expression number in different times ovule and fiber after flowering found that the expression number of fiber development in different periods were different, that is the expression in starting period was above that in the growing period,expression number  in 25d after flowering higher than that in other periods, which was the time for Health-wall development stages.  The gene contains two copies in upland cotton by Southern blot technology analysis. Because upland cotton is allotetraploid, it is speculated that there is a copy  existing in A, D sub-group,respactively.
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