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舞影脚

金虫 (职业作家)

[交流] 【求助/交流】求助nifH基因序列提交问题

初次做实验,也没人教,自己一个人弄,结果几次了,人家都说有点问题,但我又没搞清楚他到底要我杂子,我到底应该怎么做?望明理人帮我看看呢,他在第一次来信中提到:We are currently processing your GenBank record GU338701-GU338708 and have come across an issue that requires your attention.

Upon doing a BLAST similarity search of your sequence GU338708, we noticed that there may be a reading frame shift in the translation of the nifH gene around nt1-25, relative to similar proteins.  Please confirm the sequence and translation of your submission so that we can continue to process your record.

Please send this information to:  gb-admin@ncbi.nlm.nih.gov

Appended for your reference is the GenBank flatfile with the
information we have currently and the relevant BLAST results.
他在第二次来信中说到:However BLAST similarity search results suggest possible frameshifts in the beginning of sequence in GU338708.

Please verify whether the nucleotide sequences and the corresponding features are correct. If the sequences are incorrect, please send us the corrected sequence. If the sequences in your submission are correct, then please send the correct features.

Send this information to: gb-admin@ncbi.nlm.nih.gov
然后,这个是我的GU3380708,CCCGGTACTGCATTCAGGACAGACACCGTCATGGAGATGGCCGCATCCGCCGGCTCGGTGGAAGACCTCGAGCTGGAAGA
CGTGCTGCAGATCGGCTACGGCGGCGTCAAGTGCGTCGAGTCCGGCGGTCCTGAGCCGGGCGTCGGCTGCGCCGGCCGCG
GCGTGATCACCGCGATCAACTTCCTGGAAGAGGAAGGCGCCTACAGCGACGACCTGGACTTCGTGTTCTACGACGTGCTG
GGCGACGTGGTGTGCGGCGGCTTCGCCATGCCGATCCGCGAGAACAAGGCCCAGGAAATCTACATCGTCAAT
期待有人能帮哈我

P.S.这是帮朋友问的,谢谢大家^_^
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爱猫的老鼠

铁虫 (小有名气)


舞影脚(金币+1,VIP+0):谢谢^_^ 1-21 22:19
比对的说,多看看文章吧,你希望什么结果,多找些序列自己好好学习一下,做多了就懂了的
年龄不是问题,身高不是距离,老鼠是可以爱猫的
10楼2010-01-21 21:36:14
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爱猫的老鼠

铁虫 (小有名气)

要做基因序列方面的实验,得多实践的
年龄不是问题,身高不是距离,老鼠是可以爱猫的
11楼2010-01-21 21:37:03
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