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sumwindy

金虫 (正式写手)

[交流] 求助一个A级错误

PLAT601 Type_2 Test for (Unreported) solvent accessible voids
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Crystal structures in general do not contain large solvent accessible voids
in the lattice. Most structures lose their long-range ordering when solvent
molecules leave the crystal. Only when the remaining network is strongly
bonded (e.g. zeolites and some hydrogen bonded networks) the crystal
structure may survive.
Residual voids in a structure may indicate the omission of (disordered)
density from the model. Disordered density may go undetected when smeared
since peak search programs are not designed to locate maxima on density
ridges. The presence or absence of residual density in the void may be
veryfied on a printed/plotted difference Fourier map or with PLATON/SQUEEZE.
Voids of 40 Ang**3 may accommodate H2O. Small molecules such as
Tetrahydrofuran have typical volumes in the 100 to 200 Ang**3 range.
This test reports the volume of the largest solvent accessible void in the
structure.
A paper reporting a crystal structure with a significant solvent accessible
void should at the least discuss the issue.

这个该如何修啊?
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xi2004

至尊木虫 (职业作家)

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paopaomeng(金币+1,VIP+0):谢谢交流 6-24 12:05
sumwindy(金币+2,VIP+0):谢谢 6-24 12:27
你是不是在空洞中还有残余峰啊?
或者说你已经做了squeez处理了? 如果是, 说明一下就可以了. ]

如果不是, 建议尝试去把残余加成溶剂分子
如果无法加, 建议做squeez处理.

...
xi2004-emuch@163.com
2楼2009-06-24 11:45:27
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xglegl

木虫 (正式写手)

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sumwindy(金币+3,VIP+0):thans 6-24 12:28
waiy2001(金币+1,VIP+0): 6-24 12:33
尽量找出残余峰就完事了 不行就解释吧
3楼2009-06-24 12:21:58
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