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upgo123

金虫 (小有名气)

[求助] 怎么寻找Slug Snail2转录因子的结合位点? 已有1人参与

如题,我找到了基因的启动子序列,如下,但怎么找 slug Snail2转录因子的结合位点?给我结果的同时请教我一下方法,谢谢!
Gene ID: 6591   /   Snail2   /   Slug Snail2
GAAAGGAAACCTCTGTCTTGTCTTAGCAGAGTCCCAGCAGCTGGCCTTTGGGTGTGGCCT
TGACTTCCCGGCTTGCGTTTTTACCACATGGTGCTGGCGCCACATGCCCTCCGCTGTGTC
TGAGCAGAGCACCTGTTTCGTCTGACTCACGCCATCAGCGCGCAGACTCGCCCTGCTCTG
ACAGCGGCCCAGACCTCACACGGGCATACGTGTTACTCGCTAGCACGCGGATCTGTGTAA
TGACATGCCCCATGCACAGACCCGAGCCCCATCCTCTCCTCACAGTAGGTGTGGCCGCAC
GTCCTGACGCCGATCTGTGCAGTGCACCCTCGGATACCTGCTGATGGGGCTGGGCTGGAT
TATGCCTCTGTGATCCAAATGTAAGCTTTTTTCATGCATAGTGAATTATTATTAAACGTT
GTAAATGGATTTTTGAATACACATTTTAGTAGATGATCTTGTGTTATAACTACCAGCAAA
TAAATACCAAAACATTGTCTAACACTCTTCTTTGTTGTGAATAGACTGTGTAGAGTGAAA
CAAGGAAATAATAGCCATGGCGATATGTGTTTTCTCAACTGTGCTATATCTGTAACAAAA
ATGTGTGTTTTGTGGGAAATGGAGTGAAAAGCAAGGAGGACTCCTGCTCTCATAAACCCA
GGTGCCTACATCCGAACAAACCCTCACATAGAGTAGCAAGCTTAGAAAACTGCCTCTGGC
TTTTACTCCAGGTTCCAGTTTGTGTGTGGAGAAATCGAATATGTATTCATATTTTCCTCT
CTCCTGCAAGTACAGTTCCATTAGCATAAGGATTCCTTTGAATTATTTTCTCTGTTTGAC
ATTTAAATTAGTGACTGTTGGAAGAAATAAGAATAATCATTGAAATTAGCTTAGGAAATC
TGTGAGTGCCCCACCTCACCCTCCAAACACACATACACTCTTGTTTTCTCATTCCAAGAT
TAAGAAGTTATGCAACCTGACAATGCACTTTTCTCTGACAAGTCTTGACATCACCACTGT
TATTTTCTTTTTCACTTTTTTCCTCCAGCACCTGTTAGAAACAAGAGTAGGGTGATCTTC
ATGTGAATTTGTTCTTTCCTTATTCTTTTAGCAAAAGATAGGGATAAAAGTCTGCAATGG
ACAGAGATGCTTTAAAATATGCTTGAAATTTTATATTTAAAATAAACCACCTGAAAGTAT
TTTTAGATTGAAGACCATACACAAAATAAAGGTGTTTTTGCAGTTACTAGACTGGGTTCT
TAAAACTTTAATCAATCTATATTCATAATAATATCCTTCAATTTCTTTTTTAGCATTATA
CAGGAAACTGGTAGATACTGAGATGGATTTTAATGGCTTTATACTGATGAAAATAGCACC
ACATAAAAGCAGGGGAATATTAGAAATAAAAATAATTGTCTCTAAAGACCCATACAACCC
TTTTTCCCATAAAAAAAAAGATGCACTGTAATACATGAAAAGATAAGATCTCTTGTCAAA
AGTGTGAGAGAATGTCCGGTGGTTCCAAATGACAGTTACCTCTTGCCCCCCTTCTCTGCC
AGAGTTCCTTTTTATCTTTGCAATCTTCCAGTTCTTCCGATCAGCCTGCCTTTAGAGGGC
TACAAAGCATTTCTTTCAAGCCACCATAGCTAACACGGTGACATGAGTACTTAATTTGCA
CGCGGCCGCGCTGCCCCTGGCTTCGCGGAAGCCCTGAGTAGCGCAGCGCCCTCGCCGCAC
GCAAGGCTGCAGTCCCGCTCCAGGCCAGAGTCCCAGGAGAGCGTCCTCCGCGCTCACAGG
CGCCTTTGTCTTCCCGCTTCCCCCTTCCTTTTTCAAAAGCCAAGAGGTAATTATTTGGTC
TTTGTGCAAGGCAAACCTCTCCAGATGCCACTTCCAAATATAGGCTCTCATTAACACCAG
AGGCTGGCCTGGTGTGGTGCAGGGCGGCCCTTCCTTCTCCTGGCGGACACTGTGTCCCCG
CGCGCTGGCGCTGCACCACA
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xiadongliang

金虫 (正式写手)

【答案】应助回帖

感谢参与,应助指数 +1
2楼2016-05-17 14:04:42
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upgo123

金虫 (小有名气)

引用回帖:
2楼: Originally posted by xiadongliang at 2016-05-17 14:04:42
http://alggen.lsi.upc.es/cgi-bin/promo_v3/promo/promoinit.cgi?dirDB=TF_8.3

做这个上面预测下。

怎么预测,能教我一下吗?alggen里面没有收录slug/snail2位点信息

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选择,然后坚持
3楼2016-05-18 08:16:22
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