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猛仔仔

铁杆木虫 (正式写手)

[求助] 怎么来看这种图,纠结了好久了,解决问题后定重谢!

图1注视:Characteristics of the Spirodela genome. The outer circle shows
the 32 pseudomolecules of the Spirodela genome assembly, tick scaling is
500 kb and blue and red bars depict position of telomeric and centromeric
clusters. Heatmap tracks illustrate from outer to inner circle GC content,
gene, repeat and GAGA-repeat densities. Colour map ranges are 30–50%,
0–30%, 0–70% and 0–1.5%, respectively. GC and gene content are
positively, repeat and gene densities negatively correlated, whereas GAGArepeats
are present both in gene- and repeat-rich regions. The genome
contains two rounds of ancient genome duplications. For each genomic
segment, the copy number of paralogous regions is shown as bar chart in
the innermost circle, duplication history is illustrated by red ribbons.

图2注释:OrthoMCL analysis of gene families. The Venn diagram illustrates shared and distinct cluster classes from an orthoMCL analysis of the
plant proteomes of Arabidopsis thaliana, Solanum lycopersicum, Spirodela polyrhiza, Musa acuminata and Oryza sativa spp. indica. Non-redundant data sets were
used in the analysis. Numbers below each species name show number of all genes in species set and number of clustered genes, respectively. For
each division in the Venn diagram, the top line shows the number of orthoMCL clusters and the bottom line the number of total genes in these clusters. The
different cluster classes are colour-coded by the number of species containing genes for the respective class. Divisions for each class are shaded according
to their abundance in their class with darker shades indicate larger contributions of the particular division.

怎么来看这种图,纠结了好久了,解决问题后定重谢!
1.JPG


怎么来看这种图,纠结了好久了,解决问题后定重谢!-1
2.JPG
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BALOs

新虫 (小有名气)

【答案】应助回帖

您好,请问您那可以做OrthoMCL分析吗?我想运用OrthoMCL软件找几株菌的共有基因和特异基因,但是我没装Linus系统,用不了,请问您可以做吗?如果可以可以联系我吗?非常感谢!
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