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OXFORD2010Introducing Biological Energetics
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Introduction 1 1. The Flow of Energy in Living Systems 3 References 10 2. Origins: The Early Earth 11 General references 29 References 29 3. Force and Energy Explored 31 3.1 Gravitational force 36 3.2 The electromagnetic force 40 3.3 The strong nuclear force 43 3.4 The weak nuclear force 43 References 47 4. Which Way? An Introduction to Thermodynamics 48 General references 72 References 72 5. The Building Blocks 73 General references 108 References 108 6. How Fast, How Far? Chemical Kinetics and Equilibrium 109 General references 138 References 138 7. The Strange Story of Water and Oil 139 General references 161 References 161 8. Size Matters: Proteins and Enzymes 162 8.1 Principles of protein structure 162 8.2 Some very special molecules: enzymes 178 8.3 Regulation of enzyme activity 189 8.4 Coenzymes, vitamins, and enzyme classification 192 References 199 9. Molecular Genetics—the Chemical Basis of Heredity 200 General references 222 10. Electron Gymnastics: Energy Revisited 223 10.1 How many ATP molecules are produced when electrons traverse the entire ETC? 233 10.2 What about the rotary engine? 234 References 249 11. Cells and Metabolism: Putting it all Together 250 11.1 General aspects of metabolism 250 11.2 Glycolysis 254 11.3 The reactions of glycolysis 257 11.4 The pentose phosphate pathway 265 11.5 The citric acid or tricarboxylic acid cycle 266 11.6 Regulation of the citric acid cycle 271 General references 273 References 273 12. From Prokaryotes to Eukaryotes: Getting Ready for Multicellular Life 274 General references 286 References 286 13. Multicellular Life: The Last Hurdle? 287 13.1 Multicellularity arrives 287 13.2 The evolution of plants 290 13.3 The evolution of fungi 294 13.4 The evolution of animals 296 13.5 The organization of the mammalian body 300 General references 302 References 302 Appendix A Electromagnetic Radiation 303 Appendix B Glycolysis: Chemical Structures of Intermediates 311 Appendix C TCA Cycle: Chemical Structures of Intermediates 312 Appendix D The Calvin Cycle in Photosynthesis, Showing Chemical Structures of the Intermediates, and the Enzymes Involved in each Step 313 Appendix E Amino Acid Structures 315 Index 319 |
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