24小时热门版块排行榜    

查看: 1283  |  回复: 6
当前主题已经存档。

imation

铁杆木虫 (正式写手)

[交流] [求助]materials studio 集群安装

各位虫友,我需要安装material studio 4.1(UNIX版)在linux cluster上,安装过程中出现了Gateway设置无法执行以及gunzip无法预知的文件结束(请参见下文中的粗体标记部分),请教如何解决?
谢谢

安装过程日志
**************************************************************
[user@hc ~]$ ./CDROM/UNIX/Install --type cluster
Running Materials Studio installer for platform Linux_IA64...
Please specify an absolute destination path [/home/user/MaterialsStudio] :
/home/user/MaterialsStudio already exists. Do you wish to continue? [Y/n]: Y

Please choose the package you wish to install:

  1. Amorphous Cell Server
  2. CASTEP Server
  3. DMol3 Server
  4. DPD Server
  5. Discover Server
  6. Equilibria Server
  7. MesoDyn Server
  8. ONETEP Server
  9. Reflex Plus Server
  10. Reflex Server
  11. Structures library
  12. VAMP Server
  13. Everything

Enter items to install (e.g. 1,2,5) , or Q to quit : 13

Starting installation...
Install log in /home/user/MaterialsStudio/install.log

Installing everything...
Checking for dependencies for HPMPI:1
Checking for dependencies for IntelRuntime: None
Do HP-MPI Installation - 2 cpus are available
Please remember that HP-MPI must be installed on each node
of the cluster.

Do you still want to continue the installation? [Y/n]: Y
Should HPMPI use SSH? [Y/n]: Y
Configuring HP-MPI installation
Setting up machines.LINUX file in /home/user/MaterialsStudio/share/data
Checking for dependencies for MKL:1
Checking for dependencies for AmorphousCellData: None
Checking for dependencies for AmorphousCellServer:4
Checking for dependencies for DiscoverServer:5
Checking for dependencies for DiscoverData: None
Checking for dependencies for DiscoverForcefields: None
Checking for dependencies for SharedSetup:2
Checking for dependencies for GatewayTmp: None
Please specify the location for temporary files (required for certain
computational servers), e.g., /tmp or /usr/tmp.  Enter ./tmp if you prefer
to create these files in the directory where the job is being run. Please
note that the ./tmp setting could create additional I/O overhead and thereby
affect performance: ./tmp
Configuring environment setup
Setting installation path in environment setup script files
Checking for dependencies for GatewayRemote:2
Checking for dependencies for GatewayLocal: None
Configuring Gateway to use default port
Configuring Gateway for cluster access
./config/configure: line 89: perl/bin/perl: cannot execute binary file
Configuring Gateway for supported queueing systems
./config/configure: line 89: perl/bin/perl: cannot execute binary file
Creating Stand alone Discover script /home/user/MaterialsStudio/Discover/bin/RunDiscover.sh
Creating Stand alone AmorphousCell script /home/user/MaterialsStudio/AmorphousCell/bin/RunAmorphousCell.sh
Checking for dependencies for CASTEPData: None
Checking for dependencies for CASTEPServer:5
Creating Stand alone CASTEP script /home/user/MaterialsStudio/CASTEP/bin/RunCASTEP.sh
Checking for dependencies for DMol3ClientServerData: None
Checking for dependencies for DMol3Data:3
Checking for dependencies for DMol3Server:6
Checking for dependencies for Dmol3Data: None
cat: Linux_IA64/: Is a directory

gunzip: stdin: unexpected end of file
Creating Stand alone DMol3 script /home/user/MaterialsStudio/DMol3/bin/RunDMol3.sh
Checking for dependencies for DPDData: None
Checking for dependencies for DPDServer:3
Creating Stand alone DPD script /home/user/MaterialsStudio/DPD/bin/RunDPD.sh
Checking for dependencies for EquilibriaData: None
Checking for dependencies for EquilibriaServer:4
Creating Stand alone Equilibria script /home/user/MaterialsStudio/Equilibria/bin/RunEquilibria.sh
Checking for dependencies for MesoDynData: None
Checking for dependencies for MesoDynServer:4
Creating Stand alone MesoDyn script /home/user/MaterialsStudio/MesoDyn/bin/RunMesoDyn.sh
Checking for dependencies for PowderIndexingData: None
Checking for dependencies for PowderSolveData: None
Checking for dependencies for ReflexClientServerData: None
Checking for dependencies for ReflexPlusServer:4
Checking for dependencies for ReflexServer:4
Checking for dependencies for Structures: None
Checking for dependencies for VAMPData: None
Checking for dependencies for VAMPServer:4
Creating Stand alone VAMP script /home/user/MaterialsStudio/VAMP/bin/RunVAMP.sh
Checking for dependencies for ONETEPServer:5
Checking for dependencies for ONETEPServerData: None
Creating Stand alone ONETEP script /home/user/MaterialsStudio/ONETEP/bin/RunONETEP.sh

System configuration details for HP-MPI
These checks assume that the default user authentication mechanism is being
used. Your System Administrator may have chosen to use an alternative
mechanism. If you find that parallel jobs fail you should consult your
System Administrator and ask them to perform appropriate configuration
work. For further details please refer your System Administrator to the
installation documentation under the info folder on your installation CD


Checking rsh

rsh package is installed.

/etc/hosts.equiv does not exist. The HP-MPI installation included as part of
this Materials Studio requires that this file exists and contains
the lines in /home/user/MaterialsStudio/hosts.equiv.
Please ask your systems administrator
to create a /etc/hosts.equiv file that contains these lines.

Materials Studio installation has completed.
[user@hc ~]$
**************************************************************

./config/configure: line 89: perl/bin/perl: cannot execute binary file
configure内容如下:
**************************************************************
#!/bin/sh

#****************************************************************************
# configure
# This script is used to configure either the gateway daemon or an installed
# server.
#
# Latest revision Apr 17 2003
# Copyright (C) 1999-2003 Accelrys, Inc.
#
#
# "Usage: configure {gateway|server|queue} [args]"
#
# At least one argument must be supplied ("gateway" or "server" or "queue"
# If the first argument is gateway, there are no further arguments required
#          (although the following may be used).
#  -port

                http port, 18888 by default
#  -path                 gateway directory, current working directory by default
#  -hostname   the name of this host, hostname() value by default
#
#
#
# If the first argument is server, args should be:
# "         server_install_template=