| ²é¿´: 410 | »Ø¸´: 0 | |||
AAССľ³æ½ð³æ (СÓÐÃûÆø)
|
[ÇóÖú]
perl±à³Ì
|
|
#!/usr/bin/perl use strict; use warnings; use vars qw #open the multiframe trajectory structure file or die my $doc = $Documents{"abc.xtd"}; if (!$doc) {die "no document";} my $trajectory = $doc->Trajectory; if ($trajectory->NumFrames>1) { print "Found ".$trajectory->NumFrames." frames in the trajectory "; # Open new xmol trajectory file my $xmolFile=Documents->New("trj.txt" ;#get atoms in the structure my $Beads = $doc->DisplayRange->Beads; my $NBeads=@$Beads; # loops over the frames my $framebegin=1; my $frameend=$trajectory->NumFrames; # my $frameend=10; for (my $frame=$framebegin; $frame<=$frameend; ++$frame){ $trajectory->CurrentFrame = $frame; #write header xyz $xmolFile->Append(sprintf "%i ", $NBeads); $xmolFile->Append(sprintf "%s %i ", "Frame",$frame); foreach my $Bead (@$Beads) { # write atom symbol and x-y-z- coordinates $xmolFile->Append(sprintf "%s %f %f %f ",$Bead->Name, $Bead->X, $Bead->Y, $Bead->Z); } } #close trajectory file $xmolFile->Close; } else { print "The " . $doc->Name . " is not a multiframe trajectory file "; ÔËÐÐÒÔÉϳÌÐò³öÏÖ£ºGlobal symbol "%Documents" requires explicit package name at C:\Users\Administrator\AppData\Local\ActiveState\KomodoIDE\8.0\samples\perl_tutorials\abl.pl line 5. Execution of C:\Users\Administrator\AppData\Local\ActiveState\KomodoIDE\8.0\samples\perl_tutorials\abl.pl aborted due to compilation errors. Ôõô»ØÊ£¿¸ÃÔõô¸Ä£¿£¿ |
» ²ÂÄãϲ»¶
284Çóµ÷¼Á
ÒѾÓÐ10È˻ظ´
һ־Ըɽ¶«´óѧҩѧѧ˶Çóµ÷¼Á
ÒѾÓÐ4È˻ظ´
07»¯Ñ§280·ÖÇóµ÷¼Á
ÒѾÓÐ4È˻ظ´
298-Ò»Ö¾Ô¸Öйúũҵ´óѧ-Çóµ÷¼Á
ÒѾÓÐ12È˻ظ´
Çó²ÄÁÏ£¬»·¾³×¨Òµµ÷¼Á
ÒѾÓÐ3È˻ظ´
335Çóµ÷¼Á
ÒѾÓÐ5È˻ظ´
Çóµ÷¼Á
ÒѾÓÐ7È˻ظ´
Ò»Ö¾Ô¸¼ª´ó»¯Ñ§322Çóµ÷¼Á
ÒѾÓÐ4È˻ظ´
»·¾³Ñ§Ë¶288Çóµ÷¼Á
ÒѾÓÐ8È˻ظ´
341Çóµ÷¼Á(Ò»Ö¾Ô¸ºþÄÏ´óѧ070300)
ÒѾÓÐ6È˻ظ´














;
»Ø¸´´ËÂ¥