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[求助]
高斯优化The combination of multiplicity 1 and 169 electrons is impossible. 已有2人参与
大家帮我看看,我用AM1优化一个小分子,明明分子的净电荷为0,gaussian AM1后却提示:
Rotational constants (GHZ): 0.1489640 0.0741426 0.0676461
Standard basis: VSTO-6G (5D, 7F)
The combination of multiplicity 1 and 169 electrons is impossible.
Error termination via Lnk1e in /public/software/gaussian/g09/l301.exe at Thu Mar 20 14:51:03 2014.
Job cpu time: 0 days 0 hours 0 minutes 0.2 seconds.
File lengths (MBytes): RWF= 9 Int= 0 D2E= 0 Chk= 1 Scr= 1
请问这是为什么
1.jpg是该分子的结构。
mol2文件是
# Name: CNF_108330
# Creating user name: 8004
# Creation time: Thu Mar 20 14:23:15 2014
# Modifying user name: 8004
# Modification time: Thu Mar 20 14:23:33 2014
@<TRIPOS>MOLECULE
CNF_108330
60 63 3 12 3
BIOPOLYMER
GAST_HUCK
@<TRIPOS>DICT
BIOPOLYMER macromol
@<TRIPOS>ATOM
1 S -28.910200 -33.982900 9.162600 S.3 1 SULFHYDRYL -0.054400
2 N2 -27.720500 -32.153600 7.467800 N.pl3 2 K9Y701 -0.238900
3 C3 -28.278800 -33.401400 7.603600 C.2 2 K9Y701 0.177900
4 N7 -28.285800 -34.063500 6.517300 N.2 2 K9Y701 -0.214100
5 C5 -27.382200 -32.130900 6.174200 C.2 2 K9Y701 0.124300
6 C6 -27.670600 -33.204800 5.551500 N.2 2 K9Y701 -0.229100
7 C10 -25.169824 -30.120425 3.788136 C.ar 2 K9Y701 -0.032500
8 C11 -25.594463 -28.813576 4.049199 C.ar 2 K9Y701 0.076800
9 C12 -26.538203 -28.592837 5.058967 C.ar 2 K9Y701 -0.032500
10 C13 -27.106111 -29.673359 5.740376 C.ar 2 K9Y701 -0.055500
11 C14 -26.714300 -30.983400 5.447000 C.ar 2 K9Y701 0.014300
12 C15 -25.707579 -31.196829 4.499732 C.ar 2 K9Y701 -0.055500
13 N16 -25.334033 -23.662391 0.941044 N.pl3 2 K9Y701 -0.106700
14 C17 -25.914602 -24.604906 1.643775 C.2 2 K9Y701 0.218900
15 C18 -27.212425 -24.288950 1.766220 C.2 2 K9Y701 -0.019400
16 C19 -27.376965 -23.012102 1.066481 C.2 2 K9Y701 -0.004100
17 N20 -26.232683 -22.708988 0.621081 N.2 2 K9Y701 -0.167200
18 C21 -28.639484 -22.198354 0.899161 C.3 2 K9Y701 -0.046300
19 C22 -24.034075 -23.616892 0.569383 C.ar 2 K9Y701 0.122800
20 C23 -23.038547 -23.585276 1.549091 C.ar 2 K9Y701 -0.026500
21 C24 -21.689931 -23.573876 1.181405 C.ar 2 K9Y701 -0.060800
22 C25 -21.326914 -23.590300 -0.170263 C.ar 2 K9Y701 -0.049300
23 C26 -22.326630 -23.584931 -1.149338 C.ar 2 K9Y701 -0.060800
24 C27 -23.675275 -23.583037 -0.781914 C.ar 2 K9Y701 -0.026500
25 C28 -19.850554 -23.611903 -0.585542 C.3 2 K9Y701 -0.032700
26 N29 -25.278688 -25.692905 2.154276 N.am 2 K9Y701 -0.178700
27 C30 -25.832829 -26.723791 2.836691 C.2 2 K9Y701 0.327100
28 O31 -27.033114 -26.765225 3.029636 O.2 2 K9Y701 -0.377000
29 N32 -25.053638 -27.731824 3.299678 N.am 2 K9Y701 -0.207800
30 C33 -29.692639 -23.057216 0.145496 C.3 2 K9Y701 -0.085900
31 C34 -29.189421 -21.802824 2.299094 C.3 2 K9Y701 -0.085900
32 C35 -28.306700 -20.917190 0.085165 C.3 2 K9Y701 -0.085900
33 H -29.207159 -34.887611 8.833332 H 1 SULFHYDRYL 0.137000
34 C1 -27.459700 -31.169900 8.512000 C.3 3 ETHYL 0.018600
35 H3 -24.417877 -30.301969 3.027014 H 2 K9Y701 0.052800
36 H4 -26.831327 -27.583571 5.328130 H 2 K9Y701 0.052800
37 H5 -27.858386 -29.492842 6.502232 H 2 K9Y701 0.063800
38 H6 -25.329955 -32.196587 4.318263 H 2 K9Y701 0.063800
39 H7 -28.029786 -24.802087 2.265824 H 2 K9Y701 0.022100
40 H8 -23.317762 -23.571590 2.597933 H 2 K9Y701 0.059500
41 H9 -20.926799 -23.551472 1.953047 H 2 K9Y701 0.055000
42 H10 -22.057306 -23.578634 -2.201059 H 2 K9Y701 0.055000
43 H11 -24.444680 -23.548596 -1.547063 H 2 K9Y701 0.059500
44 H12 -19.335010 -24.500405 -0.191084 H 2 K9Y701 0.038500
45 H13 -19.357831 -22.709742 -0.193513 H 2 K9Y701 0.038500
46 H14 -19.762970 -23.621061 -1.682594 H 2 K9Y701 0.038500
47 H15 -24.292874 -25.726036 2.029491 H 2 K9Y701 0.234500
48 H16 -24.076355 -27.755995 3.096686 H 2 K9Y701 0.231200
49 H17 -29.919245 -23.970373 0.717232 H 2 K9Y701 0.013100
50 H18 -29.319670 -23.353457 -0.846673 H 2 K9Y701 0.013100
51 H19 -30.625541 -22.489248 0.008550 H 2 K9Y701 0.013100
52 H20 -29.420701 -22.700328 2.892889 H 2 K9Y701 0.013100
53 H21 -30.109584 -21.206862 2.196477 H 2 K9Y701 0.013100
54 H22 -28.447100 -21.203735 2.848888 H 2 K9Y701 0.013100
55 H23 -27.552740 -20.306844 0.604897 H 2 K9Y701 0.013100
56 H24 -29.212612 -20.306547 -0.051125 H 2 K9Y701 0.013100
57 H25 -27.911506 -21.183512 -0.906989 H 2 K9Y701 0.013100
58 H1 -28.361447 -30.562220 8.677899 H 3 ETHYL 0.044300
59 H2 -26.618699 -30.516183 8.236266 H 3 ETHYL 0.044300
60 H26 -27.195547 -31.672045 9.454465 H 3 ETHYL 0.044300
@<TRIPOS>BOND
1 1 33 1
2 2 3 am
3 5 2 am
4 4 3 2
5 3 1 1
6 6 4 1
7 5 6 2
8 11 5 1
9 8 7 ar
10 7 12 ar
11 8 9 ar
12 29 8 1
13 9 10 ar
14 10 11 ar
15 12 11 ar
16 14 13 1
17 13 17 1
18 13 19 1
19 14 15 2
20 26 14 1
21 15 16 1
22 16 17 2
23 16 18 1
24 18 30 1
25 18 31 1
26 18 32 1
27 19 20 ar
28 19 24 ar
29 20 21 ar
30 21 22 ar
31 23 22 ar
32 22 25 1
33 24 23 ar
34 27 26 1
35 27 28 2
36 29 27 1
37 34 58 1
38 7 35 1
39 9 36 1
40 10 37 1
41 12 38 1
42 15 39 1
43 20 40 1
44 21 41 1
45 23 42 1
46 24 43 1
47 25 44 1
48 25 45 1
49 25 46 1
50 26 47 1
51 29 48 1
52 30 49 1
53 30 50 1
54 30 51 1
55 31 52 1
56 31 53 1
57 31 54 1
58 32 55 1
59 32 56 1
60 32 57 1
61 2 34 1
62 34 59 1
63 34 60 1
@<TRIPOS>SUBSTRUCTURE
1 SULFHYDRYL 1 PERM 0 **** **** 1
2 K9Y701 3 GROUP 4 A **** 2 ROOT K9Y A 701
3 ETHYL 34 PERM 0 **** **** 1
@<TRIPOS>SET
UNK_ATOMS STATIC ATOMS AMSOM **** Atom types guessed for these atoms
32 0 0 2 3 0 0 4 5 6 7 8 9 10 11 12 13 14 15 16 \
17 18 19 20 21 22 23 24 25 30 31 32 0
LIGDB STATIC ATOMS AMSOM **** Atom types from ligand database
4 26 27 28 29
HETATM STATIC SUBSTS AMSOM ****
1 3
@<TRIPOS>ROTATABLE_BOND
5 4 1 1 1 0 1 10 0 359
8 15 7 2 1 0 1 10 0 359
18 17 28 3 1 0 1 10 0 359
23 22 26 4 1 0 1 10 0 359
24 23 54 5 1 0 1 10 0 359
25 23 57 6 1 0 1 10 0 359
26 23 60 7 1 0 1 10 0 359
32 31 49 8 1 0 1 10 0 359
61 3 63 9 1 0 1 10 0 359
@<TRIPOS>ANCHOR_ATOM
3
@<TRIPOS>NORMAL
@<TRIPOS>FF_PBC
FORCE_FIELD_SETUP_FEATURE Force Field Setup information
v1.0 0 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 NONE 0 0 0 0 0 0 0 0 0 0 0 0 0
@<TRIPOS>SEARCH_OPTS
1 0 1 1 3.000000e+001 0 9.500000e-001 6.500000e-001 8.700000e-001 0 0
高斯输入文件:
%chk=CNF_108330.chk
%mem=100MW
%nproc=1
# opt=(maxcycle=10000,maxstep=5000) am1 scf=(maxcycle=5000)
CNF_108330.mol2 file convert to .com file
0 1
S -28.9102000 -33.9829000 9.1626000
N2 -27.7205000 -32.1536000 7.4678000
C3 -28.2788000 -33.4014000 7.6036000
N7 -28.2858000 -34.0635000 6.5173000
C5 -27.3822000 -32.1309000 6.1742000
C6 -27.6706000 -33.2048000 5.5515000
C10 -25.1698240 -30.1204250 3.7881360
C11 -25.5944630 -28.8135760 4.0491990
C12 -26.5382030 -28.5928370 5.0589670
C13 -27.1061110 -29.6733590 5.7403760
C14 -26.7143000 -30.9834000 5.4470000
C15 -25.7075790 -31.1968290 4.4997320
N16 -29.0063010 -26.6930400 3.4269560
C17 -27.7693120 -26.8677010 3.0287470
C18 -27.7398810 -27.9472850 2.2332660
C19 -29.1164130 -28.4479470 2.1939280
N20 -29.7922260 -27.6666650 2.9236630
C21 -29.6485900 -29.6503110 1.4487800
C22 -29.4664730 -25.6984040 4.2200720
C23 -29.1278200 -25.6860100 5.5754560
C24 -29.5660690 -24.6461390 6.4004970
C25 -30.3500950 -23.6120020 5.8761670
C26 -30.7180740 -23.6465860 4.5265590
C27 -30.2908840 -24.6932370 3.7044410
C28 -30.8088080 -22.4483140 6.7638470
N29 -26.7215300 -26.0795640 3.3889420
C30 -25.4253530 -26.4483800 3.5282010
O31 -24.5845030 -25.6395650 3.8723230
N32 -25.0536380 -27.7318240 3.2996780
C33 -29.3893040 -29.4528980 -0.0706230
C34 -28.9179790 -30.9308450 1.9438830
C35 -31.1728440 -29.7767350 1.7233370
H -29.2071590 -34.8876110 8.8333320
C1 -27.4597000 -31.1699000 8.5120000
H3 -24.4178770 -30.3019690 3.0270140
H4 -26.8313270 -27.5835710 5.3281300
H5 -27.8583860 -29.4928420 6.5022320
H6 -25.3299550 -32.1965870 4.3182630
H7 -26.9194380 -28.4230400 1.7026770
H8 -28.5206390 -26.4874340 5.9844420
H9 -29.2937300 -24.6479450 7.4512750
H10 -31.3415610 -22.8599190 4.1129020
H11 -30.6053190 -24.7287170 2.6659350
H12 -29.9515900 -21.9039810 7.1877530
H13 -31.4199870 -22.8483280 7.5865280
H14 -31.4134630 -21.7381820 6.1795680
H15 -26.9338600 -25.1297030 3.5918580
H16 -24.4083460 -27.9542620 2.5709870
H17 -28.3100130 -29.3517750 -0.2629520
H18 -29.8932640 -28.5468820 -0.4399850
H19 -29.7673000 -30.3153330 -0.6406890
H20 -27.8345560 -30.8528160 1.7658120
H21 -29.2949090 -31.8184590 1.4124110
H22 -29.0836570 -31.0755800 3.0226930
H23 -31.3685380 -29.9055690 2.7986040
H24 -31.5850640 -30.6469680 1.1895720
H25 -31.7015470 -28.8738410 1.3816700
H1 -28.3614470 -30.5622200 8.6778990
H2 -26.6186990 -30.5161830 8.2362660
H26 -27.1955470 -31.6720450 9.4544650
AMQ后出错:
![高斯优化The combination of multiplicity 1 and 169 electrons is impossible.]()
1.jpg |
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