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To investigate the role of each of the HIF-a subunits in human
HSPCs, we constructed bicistronic lentiviral vectors carrying two
distinct promoters, EF1a and H1, driving green fluorescent pro-
tein (GFP) (reporter) and a small hairpin RNA (shRNA) against the
HIF-1a (sequence published in Rezvani et al., 2007) or HIF-2a
subunit, respectively (Figure S1B). To confirm the specificity
and efficiency of these vectors, CD34+ cells were transduced
(45%¨C80% transduction efficiency), FACS-sorted 4 days post-
transduction, and cultured for an additional 4 days prior to our
assessment of mRNA levels. A significant reduction in mRNA
levels was observed for both HIF-1a and HIF-2a vectors relative
to controls, with a decrease of 88% and 78%, respectively (Fig-
ure 1B). The KD was also confirmed at the protein level in CD34+
cells (Figure 1C) and in 293T cells (Figure S1C). The shHIF1a
used in this study has been previously validated elsewhere
(Rezvani et al., 2007). However, to confirm the specificity and
exclude off-target effects of the shRNA for HIF-2a, we tested a
second shHIF2a (shHIF2a.2) (Figure S1D). Using this second
vector, we confirmed an efficient KD at the protein level, as
well as similar defects in vivo compared to the first shRNA
used (shHIF2a.1) (Figure S1E). We then used the construct that
gave us the best silencing activity (shHIF2a.1) for the rest of
this study.
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