24小时热门版块排行榜    

Znn3bq.jpeg
查看: 7481  |  回复: 11
当前只显示满足指定条件的回帖,点击这里查看本话题的所有回帖

凌波丽

专家顾问 (知名作家)

[交流] 居群遗传分析软件GenAlEx教程:GenAlEx 6.5 Tutorials(1-6)-Free 已有9人参与

居群遗传分析软件GenAlEx 6.5 Tutorials(1-6)& A Comprehensive Guide to GENALEX6.4(2012)

文件可以从原网站
http://biology.anu.edu.au/GenAlEx/Tutorials.html
下载,也可以从本帖附件下载。

An Overview of Topics


We are pleased to offer a series of self-paced tutorials on population genetic analysis that employ hand calculations and exercises within GenAlEx. These are drawn in part from the graduate workshops that we have offered (jointly and independently), around the world.  Click the links below to download tutorials 1 to 6 which have now been revised to bring them up to date with the new features of GenAlEx 6.5.

Tutorial 1 (zip 6.9 mb)
An Introduction to Frequency-Based Population Genetic Analysis: scoring genetic markers, Allele Frequency, Heterozygosity, F-statistics, Nei Genetic Distance, Shannon Diversity Indices and Chi-square tests for Hardy-Weinberg Equilibrium


Tutorial 2 (zip 1.3 mb)
Genetic Distance and AMOVA: Haploid, Codominant and Binary Genetic Distance,AMOVA and F-statistics


Tutorial 3 (zip 4.5 mb)
Spatial Genetic Analysis: Principal Coordinate Analysis (PCoA), Mantel Tests for Matrix Correspondence and Spatial Autocorrelation Analysis


Tutorial 4 (zip 2.6 mb)
Advanced Frequency-Based Analysis: DNA Profile Probability, Probability of Identity, Probability of Exclusion, Population Assignment and Pairwise Relatedness


Tutorial 5 (zip 2 mb)
Advanced Features Including Data Import and Export: Working with DNA sequences, importing and processing raw genotypic data, exporting data from GenAlEx to other software. The Stats menu and how to customise the GenAlEx menu are also covered briefly.


Tutorial 6 (zip 1 mb)
TwoGener: Male gametic inference, male gametic distances, gametic AMOVA



Coming soon - New tutorials outlining some of the new features in GenAlEx 6.5


Tutorial 7:
New estimators of population genetic structure:  G’ST, G’’ST and Jost’s Dest, and standardized F’ST via AMOVA

Tutorial 8:
Pairwise Linkage Disequilibrium: estimation of D, D’, r, and r2 for biallelic markers[ Last edited by 凌波丽 on 2013-7-19 at 11:30 ]
回复此楼

» 本帖附件资源列表

» 收录本帖的淘帖专辑推荐

专业电子书 核酸生物学实验经验 生物信息学 考博
我的地盘你做主 系统生物学 生物化学和分子生物学 分子生物学

» 猜你喜欢

已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

魔羯扎西

新虫 (初入文坛)


小木虫: 金币+0.5, 给个红包,谢谢回帖
引用回帖:
3楼: Originally posted by 咯咯4321 at 2013-11-26 11:02:56
你好,GENALEX处理的数据格式有木有特别要求啊?这个英文说明看的我实在头大

你好 这个你会用了吗?
扎西不扎心
5楼2014-11-07 15:31:00
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖
查看全部 12 个回答

凌波丽

专家顾问 (知名作家)

2楼2013-07-19 11:32:14
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

咯咯4321

新虫 (小有名气)


小木虫: 金币+0.5, 给个红包,谢谢回帖
你好,GENALEX处理的数据格式有木有特别要求啊?这个英文说明看的我实在头大
3楼2013-11-26 11:02:56
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

咯咯4321

新虫 (小有名气)


小木虫: 金币+0.5, 给个红包,谢谢回帖
引用回帖:
5楼: Originally posted by 魔羯扎西 at 2014-11-07 15:31:00
你好 这个你会用了吗?...

没有,放弃了好像,不记得了

[ 发自小木虫客户端 ]
6楼2014-11-08 00:59:22
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖
普通表情 高级回复 (可上传附件)
最具人气热帖推荐 [查看全部] 作者 回/看 最后发表
[考研] 考研调剂 +18 硕星赴 2026-04-09 19/950 2026-04-10 02:08 by belle15
[考研] 277 数一104,学硕,求调剂 +8 瓶子PZ 2026-04-09 8/400 2026-04-10 00:17 by lwk2004
[考博] 博士自荐 +5 可可小胖 2026-04-08 5/250 2026-04-09 20:51 by leapmouse
[考研] 085600材料与化工301分求调剂院校 +33 刺痛jk 2026-04-06 34/1700 2026-04-09 18:31 by hy861222
[考研] 一志愿中科院105500专业总分315求调剂 +6 lallalh 2026-04-09 7/350 2026-04-09 17:51 by lallalh
[考研] 考研调剂 +13 冰冰,,, 2026-04-07 13/650 2026-04-09 17:01 by Lilly_Li
[硕博家园] 有没有学校材料专业收跨调(一志愿085410) +5 momo(上岸版) 2026-04-06 8/400 2026-04-09 15:07 by only周
[考研] 085801 总分275 本科新能源 求调剂 +8 bradoner 2026-04-08 9/450 2026-04-09 13:43 by only周
[考研] 308求调剂 +17 墨墨漠 2026-04-06 17/850 2026-04-09 09:25 by 壹往無前
[考研] 求调剂 +15 熊二想上岸 2026-04-04 15/750 2026-04-08 22:52 by 猪会飞
[考研] 求调剂 +13 柒luck 2026-04-07 13/650 2026-04-08 22:46 by 猪会飞
[考研] 277求调剂 +16 倪建设 2026-04-06 16/800 2026-04-08 21:28 by zhouxiaoyu
[考研] 求调剂 +28 111623 2026-04-04 33/1650 2026-04-08 09:24 by 泽润东方
[考研] 22408 一志愿双一流人工智能300分 四六级,数据分析国奖 +4 zzfeng123 2026-04-06 6/300 2026-04-07 21:02 by zzfeng123
[考研] 22408 331分求调剂 +4 y__1 2026-04-06 4/200 2026-04-06 17:26 by 土木硕士招生
[考研] 一志愿 江南大学 085602 化工专硕 338分求调剂 +15 路痴小琪 2026-04-05 15/750 2026-04-06 09:27 by cql1109
[考研] 化学357分,考研调剂 +11 .Starry. 2026-04-04 12/600 2026-04-06 06:28 by houyaoxu
[考研] 085600调剂 +9 东照照照 2026-04-04 9/450 2026-04-05 13:44 by ujn_zhuj
[考研] 085602调剂 初试总分335 +12 19123253302 2026-04-04 12/600 2026-04-05 08:08 by 544594351
[考研] 0854求调剂 +4 assdll 2026-04-03 4/200 2026-04-04 22:17 by hemengdong
信息提示
请填处理意见