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[求助]
R语言加载.db类包失败
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想用R语言里GO包，但是加载GO.db时总是报错， RS-DBI driver: (could not connect to dbname:unable to open database file，具体错误见下， 请教怎么才能加载db类的包？ > biocLite("GO.db"  BioC_mirror: http://bioconductor.org Using Bioconductor version 2.11 (BiocInstaller 1.8.3), R version 2.15. Installing package(s) 'GO.db' 试开URL’http://bioconductor.org/packages ... .15/GO.db_2.8.0.zip' Content type 'application/zip' length 22169151 bytes (21.1 Mb) 打开了URL downloaded 21.1 Mb package ‘GO.db’ successfully unpacked and MD5 sums checked The downloaded binary packages are in C:\Documents and Settings\Administrator\Local Settings\Temp\RtmpAtZZre\downloaded_packages > library(GO.db) Error : .onLoad failed in loadNamespace() for 'GO.db', details: call: sqliteNewConnection(drv, ...) error: RS-DBI driver: (could not connect to dbname: unable to open database file ) 错误: ‘GO.db’程辑包/名字空间载入失败 > sessionInfo() R version 2.15.1 (2012-06-22) Platform: i386-pc-mingw32/i386 (32-bit) locale: [1] LC_COLLATE=Chinese_People's Republic of China.936 LC_CTYPE=Chinese_People's Republic of China.936 LC_MONETARY=Chinese_People's Republic of China.936 [4] LC_NUMERIC=C LC_TIME=Chinese_People's Republic of China.936 attached base packages: [1] parallel splines stats graphics grDevices utils datasets methods base other attached packages: [1] BiocInstaller_1.8.3 RSQLite_0.11.2 DBI_0.2-5 AnnotationDbi_1.20.7 Biobase_2.18.0 BiocGenerics_0.4.0 WGCNA_1.27-1 doParallel_1.0.1 [9] iterators_1.0.6 foreach_1.4.0 MASS_7.3-23 reshape_0.8.4 plyr_1.8 cluster_1.14.4 Hmisc_3.10-1 survival_2.37-4 [17] flashClust_1.01-2 dynamicTreeCut_1.21 impute_1.32.0 loaded via a namespace (and not attached): [1] codetools_0.2-8 compiler_2.15.1 grid_2.15.1 IRanges_1.16.6 lattice_0.20-15 stats4_2.15.1 tools_2.15.1 [ Last edited by 841983473 on 2013-4-10 at 22:47 ] |
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2楼2013-04-11 13:22:47
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