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zhanghh1127

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9Â¥: Originally posted by mark870625 at 2012-05-26 14:18:30
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begin paup;
      
       [exset * exclude =  ;
       delete   /only; ]
      
       log file=123.txt replace=yes;   
       pset collapse=minbrlen;   
       [ctype 1.5_1:all;]
       set maxtrees=5000 increase=no;
       outgroup  CBS560.81;
       set criterion=parsimony;
         
       hsearch addseq=random  nreps=1000; roottrees outroot=monophyl;
       savetrees brlens=yes file=MP.tre replace=yes;  
       pscores ALL/ci=yes tl=yes hi=yes rc=yes ri=yes khtest=yes;
     
       bootstrap nreps=1000 Keepall=yes / AddSeq=random nreps=10;
       roottrees outroot=monophyl;
       savetrees file=BT.tre from=1 to=1 savebootp=both maxdec=0 replace=yes;
     
    end;  
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²Î¿¼ÎÄÏ×ÀïÃæµÄÊ÷Ϊ¸½¼þtree in reference.tre,

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  • ¸½¼þ 1 : temp.pdf
  • 2016-10-29 12:44:41, 24.62 K
  • ¸½¼þ 2 : tree_in_reference.pdf
  • 2016-10-29 12:44:41, 212.61 K
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