24小时热门版块排行榜    

查看: 3168  |  回复: 27
当前只显示满足指定条件的回帖,点击这里查看本话题的所有回帖

贺仪

铁杆木虫 (著名写手)

[交流] 【求助】vasp安装问题 已有5人参与

大家好!我在编译vasp时出现如下偶的错误,系统是Ubuntu10.04,IFC,mkl,都是Intel编译套装,openmpi
串行时:
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_barrier'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_critical'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_ok_to_fork'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_end_critical'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_dispatch_init_8'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_global_thread_num'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_serialized_parallel'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_end_ordered'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_fork_call'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_dispatch_next_8'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_for_static_fini'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `omp_get_num_procs'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `omp_get_max_threads'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_ordered'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `omp_get_thread_num'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_for_static_init_4'
/opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.so: undefined reference to `__kmpc_for_static_init_8'
make: *** [vasp] Error 1
并行的时候也出错:
b -ldmy ../vasp.5.lib/linpack_double.o ../vasp.4.lib/lapack_double.o -lmkl_lapack  -Wl,--start-group /opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel.a  /opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel_thread.a  /opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_core.a  -Wl,--end-group  -lguide -lpthread
g77: fftmpi.o: No such file or directory
g77: fftmpi_map.o: No such file or directory
g77: ../vasp.4.lib/lapack_double.o: No such file or directory
g77: /opt/intel/mkl/10.0.4.023/lib/em64t/libmkl_intel.a: No such file or directory
mpif77: No such file or directory
make: *** [vasp] Error 1
Makefile文件下面给出。麻烦大家帮我分析……

[ Last edited by 贺仪 on 2010-8-17 at 18:21 ]
回复此楼
嘟啦啦嘟啦啦嘟
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

zzy870720z

荣誉版主 (文坛精英)

优秀版主优秀版主优秀版主优秀版主


小木虫(金币+0.5):给个红包,谢谢回帖交流
引用回帖:
Originally posted by 贺仪 at 2010-08-18 20:04:33:
在另外一台电脑上编译时,也是出现这样的错误
pif90  -O3  -c xml.f90
xml.f90:974.132:

"," name=",1H",A,1H",">",A,""',ADVANCE="Yes&q ...

这个应该不用改吧
不改试试
博学、审问、慎思、明辨、笃学
21楼2010-08-18 21:26:32
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖
查看全部 28 个回答

贺仪

铁杆木虫 (著名写手)

串行的Makefile,只写了关键部分:
FC=ifort
# fortran linker
FCL=$(FC)

CPP     = $(CPP_)  -DHOST=\"LinuxIFC\" \
          -Dkind8 -DCACHE_SIZE=16000 -DPGF90 -Davoidalloc -DNGXhalf \
         -DRPROMU_DGEMV  -DRACCMU_DGEMV \
         -DNOZTRMM
FFLAGS =  -FR -lowercase -assume byterecl
BLAS=-L/opt/intel/mkl/10.0.4.023/lib/em64t -lmkl -lpthread
LAPACK= ../vasp.5.lib/lapack_double.o
LIB  = -L../vasp.5.lib -ldmy \
     ../vasp.5.lib/linpack_double.o $(LAPACK) \
     $(BLAS)
FFT3D   = fft3dfurth.o fft3dlib.o
嘟啦啦嘟啦啦嘟
2楼2010-08-17 18:15:04
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

贺仪

铁杆木虫 (著名写手)

并行部分:
前面的都注释了
FC=mpif77(服务器没有mpif90)
FCL=$(FC)
CPP    = $(CPP_) -DMPI  -DHOST=\"LinuxIFC\" -DIFC \
     -Dkind8 -DCACHE_SIZE=16000 -DPGF90 -Davoidalloc -DNGZhalf \
     -DMPI_BLOCK=8000 \
     -DRPROMU_DGEMV  -DRACCMU_DGEMV \
     -DNOZTRMM -DSCALAPACK(这一段火来加的,加了没影响)
LIB     = -L../vasp.5.lib -ldmy  \
      ../vasp.5.lib/linpack_double.o \ $(LAPACK) \
      $(SCA) $(BLAS)
FFT3D   = fftmpi.o fftmpi_map.o fft3dfurth.o fft3dlib.o
嘟啦啦嘟啦啦嘟
3楼2010-08-17 18:18:26
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖

zzy870720z

荣誉版主 (文坛精英)

优秀版主优秀版主优秀版主优秀版主


小木虫(金币+0.5):给个红包,谢谢回帖交流
感觉是你的Makefile中blas指定的有问题
应该是缺少一些库没有指定
博学、审问、慎思、明辨、笃学
4楼2010-08-17 21:45:21
已阅   回复此楼   关注TA 给TA发消息 送TA红花 TA的回帖
普通表情 高级回复 (可上传附件)
最具人气热帖推荐 [查看全部] 作者 回/看 最后发表
[考博] 售SCI一区T0P文章,我:8O.55.1.O.5.4,科目齐全,可+急 +3 j5mmowWXNWxv 2026-09-05 4/200 2026-09-06 19:21 by eObJPa4gWmp6
[博后之家] 售SCI一区T0P文章,我:8O.55.1.O.54,科目全,可伽急 +3 j5mmowWXNWxv 2026-09-05 6/300 2026-09-06 18:41 by eObJPa4gWmp6
[博后之家] 售SCI一区T0P文章,我:8.O55.1.O.54,科目全,可十急 +3 jPDp0sc2B7zQ 2026-09-05 6/300 2026-09-06 18:09 by eObJPa4gWmp6
[公派出国] 售SCI一区T0P文章,我:8.O.55.1.O54,科目全,可伽急 +3 jPDp0sc2B7zQ 2026-09-05 4/200 2026-09-06 18:09 by eObJPa4gWmp6
[论文投稿] 售SCI文章,我:8O5.5.1.O.54,科目齐全,可+急 +4 jPDp0sc2B7zQ 2026-09-05 6/300 2026-09-06 18:01 by eObJPa4gWmp6
[文学芳草园] 两块石头 +7 阿美_Lml888 2026-09-03 9/450 2026-09-06 17:48 by myrtle
[公派出国] 售SCI一区T0P文章,我:8.O.55.1.O.5.4,科目全,可+急 +3 jPDp0sc2B7zQ 2026-09-05 6/300 2026-09-06 17:21 by eObJPa4gWmp6
[考研] 售SCI文章,我:8O.5.5.1O.54,科目全,可十急 +3 jPDp0sc2B7zQ 2026-09-04 8/400 2026-09-06 17:09 by eObJPa4gWmp6
[博后之家] 广西大学-广州大学招聘博士后 欢迎广大优秀人才!!! +5 SCSIOyxguo 2026-09-03 8/400 2026-09-06 15:06 by 可爱小花朵
[教师之家] 售SCI一区T0P文章,我:8.O55.1.O.54,科目全,可十急 +3 j5mmowWXNWxv 2026-09-05 3/150 2026-09-06 13:09 by eObJPa4gWmp6
[考博] 售SCI文章,我:8O5.5.1.O.54,科目齐全,可+急 +3 j5mmowWXNWxv 2026-09-05 4/200 2026-09-06 12:29 by eObJPa4gWmp6
[硕博家园] 售SCI一区T0P文章,我:8.O55.1.O.54,科目全,可十急 +3 jPDp0sc2B7zQ 2026-09-05 7/350 2026-09-06 11:20 by eObJPa4gWmp6
[基金申请] 科研人应该花精力去思考如何解决问题,而不是去凝练问题 +10 瞬息宇宙 2026-09-01 19/950 2026-09-06 11:15 by jiangxuan2004
[博后之家] 售SCI一区T0P文章,我:8.O.55.1.O.5.4,科目全,可+急 +3 jPDp0sc2B7zQ 2026-09-05 8/400 2026-09-06 11:09 by eObJPa4gWmp6
[论文投稿] 售SCI一区T0P文章,我:8.O.55.1.O54,科目全,可伽急 +6 7ZYIEW2YWn72 2026-09-04 9/450 2026-09-06 06:00 by E1iiBLMU2XnD
[基金申请] 面上没中,邀请各位路过的虫友分析一下分数 +12 jackleilei 2026-09-03 13/650 2026-09-05 18:10 by fireguard
[文学芳草园] 初秋的晨风 +4 阿美_Lml888 2026-09-04 6/300 2026-09-05 13:51 by 阿美_Lml888
[基金申请] 学科评审组评审是指会评吗? +6 瞬息宇宙 2026-08-31 9/450 2026-09-05 13:11 by haizai99
[硕博家园] Ei源刊怎么投 +4 Fengshun9711 2026-09-04 4/200 2026-09-04 19:30 by 研途知予
[硕博家园] 哈尔滨工业大学韩晓军教授课题组招收2027年硕士推免生及博士研究生 +3 灯灯灯灯DDDD 2026-09-03 3/150 2026-09-03 21:22 by 科研皮皮猪
信息提示
请填处理意见