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【求助】用split_dos,提示OUTCAR不存在 已有2人参与
PROCAR和OUTCAR明明存在呢,可是用Split_dos时却提示不存在,还有提示split_dos和vp找不到。
是不是这个split_dos和vp有问题呢?!运行它只能得到一个DOS0和两个tmp.dat。这个split_dos和vp是从网上下载的。CODE: gleerat@gleerat-desktop:~/vasp/Si$ sh split_dos
[: 84: -a: unexpected operator
The OUTCAR does not exist, we set the Fermi level to 0
assume an unpolarized calculation, and RWIGS not set
split_dos: 96: split_dos/vp: not found
7 307
0 7 307
这是split_dos:CODE: #!/bin/ksh
# Script to break the VASP DOSCAR file into segments for
# each atomic site.
# JMS NRL 5/0/02
# Modified to also align the Fermi level from the ground state
# to E=0.0 # JMS NRL 6/19/02
# Executables reside here
#BIN=~/bin
# GH: replace this so that it looks for vp in the same directory as this script
EXE=$0 BIN=${EXE%/*}
if [ $# -ne 0 ]; then
echo "Usage: split_dos"
exit 2
fi
# Script to split the DOSCAR file into the atomic
# projections labeled by atom number
dosfile=DOSCAR
outfile=OUTCAR
infile=INCAR
# Token for splitting the files
token=$(sed -n '6 p' $dosfile | awk '{print $1}')
# Number of points
nl=$(sed -n '6 p' $dosfile | awk '{print $3}')
# Number of atoms
natom=$(sed -n '1 p' $dosfile | awk '{print $1}')
# Get the Fermi level if the OUTCAR file is present,
# else we set it to zero.
if [ -a $outfile ]; then
echo "The" $outfile "exists, we use it to get the Fermi level,"
echo "the RWIGS tag and the number of spins."
efermi=$(grep "E-fermi" $outfile | tail -1 | awk '{print $3}')
echo "Fermi level:" $efermi
nspin=$(grep "ISPIN" $outfile | tail -1 | awk '{print $3}')
if [ $nspin -eq 2 ]; then
echo "Spin polarized calculation"
else
echo "Unpolarized calculation"
fi
# 2.a
#JMS 2/3/03 Modified to accept specification by LORBIT token.
#lorbit=$(grep "LORBIT" $outfile | tail -1 | awk '{print $3}')
if [ $lorbit -ge 10 ]; then
echo "LORBIT > 10"
echo "WARNING: not completely test for vasp.4.*"
echo "Use at your own risk. Please check results for consistency."
form=1
else
# 2.a
rwigs=$(grep "RWIGS" $outfile | tail -1 | awk '{print $3}' | sed 's/\.//g')
if [ $rwigs -eq -100 ]; then
echo "RWIGS token not set"
form=0
else
echo "RWIGS token set"
form=1
fi
# 2.a
fi
# 2.a
else
echo "The" $outfile "does not exist, we set the Fermi level to 0"
echo "assume an unpolarized calculation, and RWIGS not set"
form=0
nspin=1
efermi=0.0
fi
# If the outcar file is not present and you wish to set something by hand
# you should do it here. Uncomment the tokens below and set them by hand.
#efermi=2.255
#form=
#nspin=
# Get the atomic coordinates
$BIN/vp >| tmp.dat
tail -$natom tmp.dat | awk '{printf "%s %12.8f %12.8f %12.8f \n", "#", $2, $3, $4}' >| tmp.dat2
# Total is first DOS
if [ $form -eq 0 ]; then i=0
else i=0
fi
start=7
end=$((start+nl-1))
echo $start $end
#exit 0
rm -f DOS0
if [ $form -eq 1 ]; then
while [ $i -le $natom ]; do
echo $i $start $end
if [ $i -gt 0 ]; then
sed -n ''$i' p' tmp.dat2 >| DOS$i
fi
if [ $i -gt 0 ]; then
# Atomic projected DOS
if [ $nspin -eq 2 ]; then
sed -n ''$start','$end' p' $dosfile | awk '{printf "%12.8f %12.8f %12.8f %12.8f %12.8f %12.8f %12.8f \n", $1+(-1)*'$efermi', $2, -1*$3, $4, -1*$5, $6, -1*$7}' >> DOS$i
else
sed -n ''$start','$end' p' $dosfile | awk '{printf "%12.8f %12.8f %12.8f %12.8f \n", $1+(-1)*'$efermi', $2, $3, $4 }' >> DOS$i
fi
else
# Total DOS
if [ $nspin -eq 2 ]; then
sed -n ''$start','$end' p' $dosfile | awk '{printf "%12.8f %12.8f %12.8f %12.8f %12.8f \n", $1+(-1)*'$efermi', $2, -1*$3, $4, -1*$5 }' >> DOS$i
else
sed -n ''$start','$end' p' $dosfile | awk '{printf "%12.8f %12.8f %12.8f \n", $1+(-1)*'$efermi', $2, $3 }' >> DOS$i
fi
fi
start=$((end+2))
end=$((start+nl-1))
i=$((i+1))
done
else
while [ $i -le 0 ]; do
echo $i $start $end
if [ $i -gt 0 ]; then
sed -n ''$i' p' tmp.dat2 >| DOS$i
fi
if [ $i -gt 0 ]; then
# Atomic projected DOS
if [ $nspin -eq 2 ]; then
sed -n ''$start','$end' p' $dosfile | awk '{printf "%12.8f %12.8f %12.8f %12.8f %12.8f %12.8f %12.8f \n", $1+(-1)*'$efermi', $2, -1*$3, $4, -1*$5, $6, -1*$7}' >> DOS$i
else
sed -n ''$start','$end' p' $dosfile | awk '{printf "%12.8f %12.8f %12.8f %12.8f \n", $1+(-1)*'$efermi', $2, $3, $4 }' >> DOS$i
fi
else
# Total DOS
if [ $nspin -eq 2 ]; then
sed -n ''$start','$end' p' $dosfile | awk '{printf "%12.8f %12.8f %12.8f %12.8f %12.8f \n", $1+(-1)*'$efermi', $2, -1*$3, $4, -1*$5 }' >> DOS$i
else
sed -n ''$start','$end' p' $dosfile | awk '{printf "%12.8f %12.8f %12.8f \n", $1+(-1)*'$efermi', $2, $3 }' >> DOS$i
fi
fi
start=$((end+2))
end=$((start+nl-1))
i=$((i+1))
done
fi
exit 0
[ Last edited by gleerat on 2010-4-11 at 22:21 ]