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Amay6276

铜虫 (小有名气)

[交流] 【求助】Abinit 设置

对与金红石结构的TiO2,如何得到它的rprim参数?有没有固定的公式?帮助里的例子多是单元素物质,怎么换了TiO2结构之后,老是返回势函数出错的信息。哪位高手帮帮忙,多谢了。
iofn2 : Please give name of formatted atomic psp file
iofn2 : for atom type   1 , psp file is ../../../Psps_for_tests/8o.pspnc
  read the values zionpsp=  6.0 , pspcod=   1 , lmax=   1

iofn2 : Please give name of formatted atomic psp file
iofn2 : for atom type   2 , psp file is ../../../Psps_for_tests/22ti.pspnc
  read the values zionpsp=  4.0 , pspcod=   1 , lmax=   2

iofn2 : deduce mpsang  =   3, n1xccc  =2501.

invars1m : enter jdtset=     1

metric : ERROR -
  Current rprimd gives negative (R1xR2).R3 .
  Rprimd =    0.000000E+00    4.594000E+00    0.000000E+00
              4.594000E+00    0.000000E+00    0.000000E+00
              2.959000E+00   -2.959000E+00    2.959000E+00
  Action : if the cell size and shape are fixed (optcell==0),
   exchange two of the input rprim vectors;
   if you are optimizing the cell size and shape (optcell/=0),
   maybe the move was too large, and you might try to decrease strprecon.

leave_new : decision taken to exit ...
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y1ding

铁杆木虫 (著名写手)

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小木虫(金币+0.5):给个红包,谢谢回帖交流
fegg7502(金币+1,VIP+0):thank you very much! 11-23 01:50
看提示
exchange two of the input rprim vectors;
2楼2009-11-22 23:37:45
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Amay6276

铜虫 (小有名气)

不知道怎么改
3楼2009-11-22 23:58:49
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Amay6276

铜虫 (小有名气)

我要用GW方法计算TiO2的能隙,第一步就卡壳了,哪位把TiO2结构优化的输入文件粘一下,不胜感激。我是个新手,明天就要跟老板聊这个,非常紧张,敬请高手指点下。
老是如下错误的信息:
invars1m : enter jdtset=     0
ingeo : takes atomic coordinates from input array xred
symspgr : the symmetry operation no.   1 is the identity
symspgr : the symmetry operation no.   2 is an inversion
symaxes : the symmetry operation no.   3 is a 2_1-axis
symplanes : the symmetry operation no.   4 is a secondary n plane
symaxes : the symmetry operation no.   5 is a 2-axis
symplanes : the symmetry operation no.   6 is a mirror plane
symaxes : the symmetry operation no.   7 is a 2_1-axis
symplanes : the symmetry operation no.   8 is a secondary n plane
symplanes : the symmetry operation no.   9 is a mirror plane
symaxes : the symmetry operation no.  10 is a tertiary 2-axis
symspgr : the symmetry operation no.  11 is a -4 axis
symaxes : the symmetry operation no.  12 is a 4_2-axis
symplanes : the symmetry operation no.  13 is a mirror plane
symaxes : the symmetry operation no.  14 is a tertiary 2-axis
symspgr : the symmetry operation no.  15 is a -4 axis
symaxes : the symmetry operation no.  16 is a 4_2-axis
symspgr : spgroup= 136  P4_2/m n m   (=D4h^14)
getkgrid : length of smallest supercell vector (bohr)=    1.118400E+01
       Simple Lattice Grid
symkpt : found identity, with number  1
invars1: mkmem  undefined in the input file. Use default mkmem  = nkpt
invars1: With nkpt_me=   18 and mkmem  =    18, ground state wf handled in core.
invars1: mkqmem undefined in the input file. Use default mkqmem = nkpt
invars1: With nkpt_me=   18 and mkqmem =    18, ground state wf handled in core.
invars1: mk1mem undefined in the input file. Use default mk1mem = nkpt
invars1: With nkpt_me=   18 and mk1mem =    18, ground state wf handled in core.

Symmetries : space group P4_2/m n m (#136); Bravais tP (primitive tetrag.)
getkgrid : length of smallest supercell vector (bohr)=    1.118400E+01
       Simple Lattice Grid
symkpt : found identity, with number  1

inread : ERROR -
  Attempted to read ndig=     5 integer digits,
   from string(1:ndig)= NSTEP, to initialize an integer variable

inarray :
  An error occurred reading data for keyword " ISTWFK",
    looking for       18 array elements.
4楼2009-11-23 02:21:18
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y1ding

铁杆木虫 (著名写手)

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小木虫(金币+0.5):给个红包,谢谢回帖交流
zxzj05(金币+1,VIP+0):讨论奖励! 11-25 10:34
引用回帖:
Originally posted by Amay6276 at 2009-11-23 02:21:
我要用GW方法计算TiO2的能隙,第一步就卡壳了,哪位把TiO2结构优化的输入文件粘一下,不胜感激。我是个新手,明天就要跟老板聊这个,非常紧张,敬请高手指点下。
老是如下错误的信息:
invars1m : enter jdtset= ...

inread : ERROR -
  Attempted to read ndig=     5 integer digits,
   from string(1:ndig)= NSTEP, to initialize an integer variable

inarray :
  An error occurred reading data for keyword " ISTWFK",
    looking for       18 array elements.

提示说的很明显了ISTWFK你设置错了
5楼2009-11-23 12:06:26
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Amay6276

铜虫 (小有名气)

这个该怎么设呢,晕啊
6楼2009-11-23 14:45:08
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wenjlu

木虫 (正式写手)

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小木虫(金币+0.5):给个红包,谢谢回帖交流
zxzj05(金币+1,VIP+0):讨论奖励! 11-25 10:35
将input文件全部内容贴出,这样才能让大家知道你哪里错了。。。
7楼2009-11-23 15:46:12
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Amay6276

铜虫 (小有名气)

ndtset      3

# Definition of parameters for the calculation of the KSS file
nbandkss1   -1         # Number of bands in KSS file (-1 means the maximum possible)
nband1      9         # Number of (occ and empty) bands to be computed
#istwfk1     10*1

# Calculation of the screening (epsilon^-1 matrix)
optdriver2  3        # Screening calculation
getkss2     -1       # Obtain KSS file from previous dataset
nband2      17       # Bands to be used in the screening calculation
ecutwfn2    2.1      # Cut-off energy of the planewave set to represent the wavefunctions
ecuteps2    3.6      # Cut-off energy of the planewave set to represent the dielectric matrix
ppmfrq2    16.7 eV  # Imaginary frequency where to calculate the screening
awtr2       1       # Note : the default awtr 1 is better

# Calculation of the Self-Energy matrix elements (GW corrections)
optdriver3  4        # Self-Energy calculation
getkss3     -2       # Obtain KSS file from dataset 1
getscr3     -1       # Obtain SCR file from previous dataset
nband3      30       # Bands to be used in the Self-Energy calculation
ecutwfn3     5.0     # Planewaves to be used to represent the wavefunctions
ecutsigx3     6.0     # Dimension of the G sum in Sigma_x
                     # (the dimension in Sigma_c is controlled by npweps)
nkptgw3      1                # number of k-point where to calculate the GW correction
kptgw3                       # k-points
  -0.125    0.000    0.000
bdgw3       4  5             # calculate GW corrections for bands from 4 to 5


# Data common to the three different datasets

# Definition of the unit cell: fcc
acell  8.681 8.681 5.592        # This is equivalent to   10.217 10.217 10.217
rprim 1.0 0.0 0.0
      0.0 1.0 0.0
      0.0 0.0 0.5

# Definition of the atom types
ntypat  2         # There is only one type of atom
znucl 8 22         # The keyword "znucl" refers to the atomic number of the
                  # possible type(s) of atom. The pseudopotential(s)
                  # mentioned in the "files" file must correspond
                  # to the type(s) of atom. Here, the only type is Silicon.
Definition of the atoms
natom 6           # There are two atoms
typat  1 1 1 1 2 2        # They both are of type 1, that is, Silicon.
xred              # Reduced coordinate of atoms
     0.3047997387897260   0.3047997387897260   0.0000000000000000
    -0.3047997387897260  -0.3047997387897260   0.0000000000000000
     0.1952002612102740   0.8047997387897259   0.5000000000000000
     0.8047997387897259   0.1952002612102740   0.5000000000000000
     0.0000000000000000   0.0000000000000000   0.0000000000000000
     0.5000000000000000   0.5000000000000000   0.5000000000000000



# Definition of the k-point grid
nkpt    50
ngkpt   4 4 4
nshiftk 4
shiftk  0.5 0.5 0.5  # These shifts will be the same for all grids
        0.5 0.0 0.0
        0.0 0.5 0.0
        0.0 0.0 0.5
istwfk  19*1         # This is mandatory in all the GW steps.

# Use only symmorphic operations
symmorphi 0

# Definition of the planewave basis set (at convergence 16 Rydberg 8 Hartree)
ecut 8.0          # Maximal kinetic energy cut-off, in Hartree

# Definition of the SCF procedure
nstep   10        # Maximal number of SCF cycles
toldfe  1.0d-6    # Will stop when this tolerance is achieved on total energy
diemac  12.0      # Although this is not mandatory, it is worth to
                  # precondition the SCF cycle. The model dielectric
                  # function used as the standard preconditioner
                  # is described in the "dielng" input variable section.
                  # Here, we follow the prescription for bulk silicon.


# This line added when defaults were changed (v5.3) to keep the previous, old behaviour
  iscf 5
tgw1_1.in lines 48-92/92 (END)                 
哪位帮我看一下,谢谢
8楼2009-11-23 21:33:15
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y1ding

铁杆木虫 (著名写手)

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小木虫(金币+0.5):给个红包,谢谢回帖交流
zxzj05(金币+2,VIP+0):讨论奖励! 11-25 10:35
istwfk  19*1         # This is mandatory in all the GW steps.

inread : ERROR -
  Attempted to read ndig=     5 integer digits,
   from string(1:ndig)= NSTEP, to initialize an integer variable

inarray :
  An error occurred reading data for keyword " ISTWFK",
    looking for       18 array elements.

看提示说的,应该是改成18
istwfk  18*1         # This is mandatory in all the GW steps.
9楼2009-11-23 22:35:28
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Amay6276

铜虫 (小有名气)

不对呀,改了还出错
10楼2009-11-23 22:52:33
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