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南通大学博士留学生-recruits doctoral students in plant genetics
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wang lab email: kaiwang92@sina.com research interests • exploration of genes or cis-regulatory elements determining important plant (crop) traits and their regulation mechanisms we are interested in applying genetic and epigenomic profiling methods to discover gene or non-coding regulatory elements across diverse plant species including cotton, rice, common/hairy vetch, and brassicaceae vegetables. these methods include atac-seq, chip-seq at whole-genome or single-cell levels. integrating with genome-editing technologies we are beginning to edit cis-regulatory elements to new germplasms with improved traits. • structure and evolution of plant centromeres the centromere is a chromosomal region that plays a key role in faithful segregation of chromosomes during cell division. in contrast to the centromere’s conserved cellular function, centromeric dna is highly diverse, which has been one of the most intriguing enigmas in biology. we are interested in studying the structure, function, and evolution of plant centromeric chromatin. we will use the chromatin immunoprecipitation combing with next-generation sequencing (chip-seq) to identify the functional centromere chromatin in plants, and to elucidate the structure, function, and evolution of plant centromere chromatin. and one of our long-term goals is to develop plant artificial chromosomes to help the genetic improvement in crops. • plant molecular cytogenetic fluorescence in situ hybridization (fish) is a reliable cytological technique for chromosome identification and further fully characterizing the genome. based on this tech, we will make efforts on the studies of plant genome karyotyping, chromosomal evolution and structural diversity, chromosomal spatial organization, and chromatin epigenetic modification. PhD international students in plant genetics and genomics research: We are currently seeking international PhD students to join our research team, with a primary focus on plant (cotton, rice, common/hairy vetch, and brassicaceae vegetables) genetics and genomics in wang lab at nantong university, china. this is an exciting opportunity to work on cutting-edge research projects that aim to advance our understanding of genetic mechanisms in plants. successful candidates will have the chance to collaborate with leading scientists, utilize state-of-the-art facilities, and contribute to impactful discoveries in the field. if you are passionate about plant genetics and are looking for a dynamic and supportive research environment, we encourage you to apply and become part of our innovative team. experimental skills, experience in cotton or crop genetics and the ability to work in a distributed team are required. interested candidates are welcome to establish contact via email to kaiwang92@sina.com selected publications 1. yu g, sun b, zhu z, mehareb em, teng a, han j, zhang h, liu j, liu x, raza g, zhang b, zhang y, wang k (2024) genome‐\wide dnase i‐\hypersensitive site assay reveals distinct genomic distributions and functional features of open chromatin in autopolyploid sugarcane. the plant journal 117:573-589 2. wang k, zhang h, khurshid h, esh a, wu c, wang q, piperidis n (2023) past and recent advances in sugarcane cytogenetics. the crop journal 11:1-8 3. yu gr, ye f, zhang x, cai j, zhu wl, zhang h, chen sb, han jl, wang k (2023) characterization of open chromatin in response to cold reveals transcription factor association with preferred binding distances in cassava. industrial crops and products 202:117055 6. xu z, chen j, meng s, xu p, zhai c, huang f, guo q, zhao l, quan y, shangguan y, meng z, wen t, zhang y, zhang x, zhao j, xu j, liu j, gao j, ni w, chen x, ji w, wang n, lu x, wang s, wang k, zhang t, shen x (2022) genome sequence of gossypium anomalum facilitates interspecific introgression breeding. plant commun 3:100350 7. han j, lopez-arredondo d, yu g, wang y, wang b, wall sb, zhang x, fang h, barragán-rosillo ac, pan x, jiang y, chen j, zhang h, zhou b-l, herrera-estrella l, zhang b, wang k (2022) genome-wide chromatin accessibility analysis unveils open chromatin convergent evolution during polyploidization in cotton. proceedings of the national academy of sciences 119:e2209743119 8. huang y, ding w, zhang m, han j, jing y, yao w, hasterok r, wang z, wang k (2021) the formation and evolution of centromeric satellite repeats in saccharum species. plant j 106:616-629 9. han j, wang p, wang q, lin q, chen z, yu g, miao c, dao y, wu r, schnable jc, tang h, wang k (2020) genome-wide characterization of dnase i-hypersensitive sites and cold response regulatory landscapes in grasses. plant cell 32:2457-2473 10. lin q, wang s, dao y, wang j, wang k (2020) the arabidopsis thaliana trehalose-6-phosphate phosphatase gene attppi enhances drought tolerance by regulating stomatal apertures. j exp bot 71:4285-4297 11. wang k, wu y, zhang w, dawe rk, jiang j (2014) maize centromeres expand and adopt a uniform size in the genetic background of oat. genome res 24:107-116 [ last edited by xiaofly5fly on 2025-2-9 at 18:39 ] [ last edited by xiaofly5fly on 2025-2-9 at 18:41 ] [ Last edited by xiaofly5fly on 2025-2-9 at 18:42 ] |
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