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lovein金虫 (小有名气)
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[交流]
【求助】麻烦帮忙看下一个“随机游走”的程序，为什么运行时老出错！！！
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整个程序如下： (*----------------------------------------------------------------------*) BeginPackage["RW2D`"] RW2D::usage = "RW2D[maxstep, ktry, range, startarea, datadirectory] reads the two - dimensional digital image file (text file) and exports the mean - square displacement of random walkers as a text file, 'msdlist2d.out'. 'maxstep' is the final value of the time step of the random walker. 'ktry' is the number of average (i.e., number of walkers). 'range' is the lower and upper limit of the voxel intensity of the pore space. 'startarea' is the dimension of a square as the percentage to the system size. The random walker starts to diffuse from inside the square which is located at the center of the image. 'datadirectory' is the directory or folder name where a single two-dimensional digital image file (text file) is located. " ShowTrajectory::usage = "ShowTrajectory[kk] is for the graphic display of the random walk trajectory of the 'kk' - th trial. " Begin["`Private`"] (* Reading the two - dimensional data in 'datadirectory' *) readdata2d[range_List, datadirectory_] := Module[{dataname, datasize, x, m2d, rmin = range[[1]], rmax = \ range[[2]]}, dataname = First[FileNames["*", {datadirectory}]]; datasize = Round[Sqrt[Length[ReadList[ToString[dataname], Real]]]]; m2d = Partition[ Map[If[rmin (* random walk *) (* 'xylist' is the trajectory of 'maxstep' - step from 'o2d' *) tra2d[maxstep_, o2d_List, m2d_List] := Module[{n2d = {{1, 0}, {-1, 0}, {0, 1}, {0, -1}}, now = o2d, xylist = {o2d}, outoffield = 0, xmax = ymax = Length[m2d], step, new, x, y}, ran2d := Random[Integer, {1, 4}]; For[i = 1, i (* random walk of 'ktry' - walkers *) (* 'tra2dktry' is list of the trajectory of 'ktry' - walkers *) rw2d[maxstep_, ktry_, startarea_, m2d_List] := Module[{xdatasize = ydatasize = Length[m2d], xylist, outoffield, tra2dktry = {}, failure = 0}, rano2d[lx_, ly_, sa_] := {Random[Integer, {(1 - sa/100)/2 lx, (1 + sa/100)/2lx}], Random[Integer, {(1 - sa/100)/2 ly, (1 + sa/100)/2ly}]}; o2d := (For[i = 1; {x0, y0} = rano2d[xdatasize, ydatasize, startarea], m2d[[x0, y0]] != 0, i++, {x0, y0} = rano2d[xdatasize, ydatasize, startarea]]; {x0, y0}); Do[{xylist, outoffield} = tra2d[maxstep, o2d, m2d]; AppendTo[tra2dktry, xylist]; AddTo[failure, outoffield], {i, 1, \ ktry}]; Return[{tra2dktry, failure}]; ]; (* calculation of the mean - square displacement *) msd2d[data_List] := Module[{ktry = Dimensions[data][[1]], maxstep = Dimensions[data][[2]] - \ 1, d1, d2, d3, dd, ii}, d1 = Transpose[data, {2, 1}]; d2 = Map[(# - First[d1]) &, d1]; d3 = Transpose[Map[(#^2) &, d2]]; dd = Apply[Plus, Transpose[Apply[Plus, d3]/ktry]]; ii = Range[0, maxstep]; msdlist2d = Transpose[{ii, dd}]; Return[msdlist2d]; ]; RW2D[maxstep_, ktry_, range_List, startarea_, datadirectory_] := Module[{failure, msdlist2d}, (* reading the two - dimensional data in 'datadirectory' *) m2d = readdata2d[range, datadirectory]; (* execution of the random walk *) {tra2dktry, failure} = rw2d[maxstep, ktry, startarea, m2d]; Print["Failure = ", failure, " / Success = ", ktry]; (* calculation of the mean - square displacement of 'ktry' walkers *) msdlist2d = msd2d[tra2dktry]; (* file output of the mean - square displacement *) (* The file name is 'msdlist2d.out' *) Export["msdlist2d.out", N[msdlist2d], "Table"]; (* graphic output of the mean - square displacement *) ListPlot[msdlist2d, PlotJoined -> True, AxesLabel -> {"time \n step", "mean-square \n displacement"}]; ]; (* graphic output of the trajectory *) (* Show the trajectory of a single walker as an example. *) (* RGBColor[] of 0, 1, 2 are colors of the pore, obstacle, and trajectory, respectively. You can change the color as you like. *) gtra2d[tra2d_List, m2d_List] := Module[{color0 = RGBColor[0.9, 0.9, 0.9], color1 = RGBColor[0.5, 0.5, 0.5], color2 = RGBColor[0.8, 0.8, 0.8], plmin = 1 - 2, plmax = Length[m2d] + 1}, tra2dshift = Map[(# - {0.5, 0.5}) &, tra2d]; tra2dm2d = (aa2 = m2d; Map[(aa2[[#[[1]], #[[2]]]] = 2) &, tra2d]; aa2); Show[ Graphics[ RasterArray[tra2dm2d /. {0 -> color0, 1 -> color1, 2 -> color2}]], Graphics[{Line[Map[Reverse, tra2dshift]], AbsolutePointSize[5.0], Point[Reverse[First[tra2dshift]]], Point[Reverse[Last[tra2dshift]]]}], PlotRange -> {{plmin, plmax}, {plmin, plmax}}, AspectRatio -> 1]; ]; (* Only for the 'kk' - th trial, the trajectory of the random walk is shown graphically *) ShowTrajectory[kk_] := gtra2d[tra2dktry[[kk]], m2d]; End[]; EndPackage[]; (*----------------------------------------------------------------------*) (* example of usage *) (*----------------------------------------------------------------------*) (* As noted below, first of all, you put the command '<< RW2D.m'. *) (* Then you can put the command set, 'RW2D[500, 200, {0, 34000}, 10, "DATAsingle"];' and 'ShowTrajectory[2];'. \ *) (* 'RW2D[maxstep, ktry, range, startarea, datadirectory]' is the command for the performance of the random walk and the calculation of mean - square displacement. *) (* The command 'ShowTrajectory[kk]' is for the graphic display of the trajectory of the 'kk' - th trial. *) (* In the example below, a trajectory of the second trial will be shown graphically. *) (* In[1] := << RW2D.m *) (* In[2] := RW2D[500, 200, {0, 34000}, 10, "DATAsingle"]; ShowTrajectory[2]; \ *) 不知道为啥，运行的时候老是出错，我又看不大懂这程序，请求帮忙 [ Last edited by lovein on 2009-10-26 at 13:35 ] |
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lovein
金虫 (小有名气)
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2楼2009-10-26 13:39:16