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2008xian

新虫 (小有名气)

[求助] CHECKCIF时,上传CIF文件后,又要求传structure factor flie

CHECKCIF时,上传CIF文件后,又要求传structure factor flie,为何说我没提交structure factor flie,没法进行完整检测。显示信息如下:
You have not supplied any structure factors. As a result the full set of tests cannot be run.

No syntax errors found.                               CIF dictionary
Please wait while processing ....                     Interpreting this report
Datablock: CdMOF-74
Bond precision:        = 0.0000 A        Wavelength=0.71073
Cell:        a=27.46300        b=27.46300        c=6.65200
alpha=90        beta=90        gamma=120
Temperature:        0 K               
Calculated        Reported
Volume        4344.890        0
Space group        R -3        R-3
Hall group        -R 3        ?
Moiety formula        C4 H Cd O3        ?
Sum formula        C4 H Cd O3        ?
Mr        209.46        0.00
Dx,g cm-3        1.441        0.000
Z        18        0
Mu (mm-1)        2.206        0.000
F000        1746.0        0.0
F000'        1732.31       
h,k,lmax               
Nref               
Tmin,Tmax               
Tmin'               
Correction method= Not given       
Data completeness=        Theta(max)=
R(reflections)=        wR2(reflections)=
S =        Npar=
The following ALERTS were generated. Each ALERT has the format
       test-name_ALERT_alert-type_alert-level.
Click on the hyperlinks for more details of the test.
Alert level A
EXPT005_ALERT_1_A  _exptl_crystal_description is missing
            Crystal habit description.
            The following tests will not be performed.
            CRYSR_01
DIFF003_ALERT_1_A  _diffrn_measurement_device_type is missing
            Diffractometer make and type. Replaces _diffrn_measurement_type.
ATOM007_ALERT_1_A  _atom_site_aniso_label is missing
            Unique label identifying the atom site.
GEOM006_ALERT_1_A  _geom_angle_atom_site_label_2 is missing
            Label identifying the atom site 2.
GEOM007_ALERT_1_A  _geom_angle_atom_site_label_3 is missing
            Label identifying the atom site 3.
PLAT029_ALERT_3_A _diffrn_measured_fraction_theta_full value Low .      0.000 Note  
PLAT043_ALERT_1_A Calculated and Reported Mol. Weight Differ by ..     209.46 Check
PLAT091_ALERT_1_A No Wavelength found in CIF - 0.71073 Ang Assumed     Please Check
PLAT183_ALERT_1_A Missing _cell_measurement_reflns_used value ....     Please Do !
PLAT184_ALERT_1_A Missing _cell_measurement_theta_min value ......     Please Do !
PLAT185_ALERT_1_A Missing _cell_measurement_theta_max value ......     Please Do !
PLAT197_ALERT_1_A Missing _cell_measurement_temperature Datum ....     Please Add  
PLAT198_ALERT_1_A Missing _diffrn_ambient_temperature   Datum ....     Please Add  
PLAT602_ALERT_2_A VERY LARGE Solvent Accessible VOID(S) in Structure        ! Info
PLAT880_ALERT_1_A Missing datum for _diffrn_reflns_number ........     Please Check
PLAT881_ALERT_1_A Missing datum for _diffrn_reflns_av_R_equivalents    Please Check
Alert level C
PLAT141_ALERT_4_C s.u. on a - Axis Small or Missing ..............    0.00000 Ang.  
PLAT143_ALERT_4_C s.u. on c - Axis Small or Missing ..............    0.00000 Ang.  
PLAT161_ALERT_4_C Missing or Zero s.u. (esd) on x-coordinate for .        ZN1 Check
And 7 other PLAT161 Alerts
More ...PLAT162_ALERT_4_C Missing or Zero s.u. (esd) on y-coordinate for .        ZN1 Check
And 7 other PLAT162 Alerts
More ...PLAT163_ALERT_4_C Missing or Zero s.u. (esd) on z-coordinate for .        ZN1 Check
And 7 other PLAT163 Alerts
More ...PLAT369_ALERT_2_C Long    C(sp2)-C(sp2) Bond  C1     -   C2     ..       1.54 Ang.  
Alert level G
PLAT004_ALERT_5_G Polymeric Structure Found with Maximum Dimension          3 Info  
PLAT005_ALERT_5_G No Embedded Refinement Details found  in the CIF     Please Do !
PLAT017_ALERT_1_G Check Consistency of Scattering Type CD      for        ZN1      
PLAT045_ALERT_1_G Calculated and Reported Z Differ by a Factor ...       0.00 Check
PLAT333_ALERT_2_G Check Large Av C6-Ring C-C Dist. C2     -C4_q          1.43 Ang.  
PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels ..........          1 Note  
PLAT808_ALERT_5_G No Parseable SHELXL Style Weighting Scheme Found     Please Check
PLAT882_ALERT_1_G Missing datum for _diffrn_reflns_av_unetI/netI .     Please Check
PLAT980_ALERT_1_G No Anomalous Scattering Factors Found in CIF ...     Please Check
  16 ALERT level A = Most likely a serious problem - resolve or explain
   0 ALERT level B = A potentially serious problem, consider carefully
  27 ALERT level C = Check. Ensure it is not caused by an omission or oversight
   9 ALERT level G = General information/check it is not something unexpected

  18 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
   3 ALERT type 2 Indicator that the structure model may be wrong or deficient
   1 ALERT type 3 Indicator that the structure quality may be low
  27 ALERT type 4 Improvement, methodology, query or suggestion
   3 ALERT type 5 Informative message, check
It is advisable to attempt to resolve as many as possible of the alerts in all categories. Often the minor alerts point to easily fixed oversights, errors and omissions in your CIF or refinement strategy, so attention to these fine details can be worthwhile. In order to resolve some of the more serious problems it may be necessary to carry out additional measurements or structure refinements. However, the purpose of your study may justify the reported deviations and the more serious of these should normally be commented upon in the discussion or experimental section of a paper or in the "special_details" fields of the CIF. checkCIF was carefully designed to identify outliers and unusual parameters, but every test has its limitations and alerts that are not important in a particular case may appear. Conversely, the absence of alerts does not guarantee there are no aspects of the results needing attention. It is up to the individual to critically assess their own results and, if necessary, seek expert advice.

Publication of your CIF in IUCr journals
A basic structural check has been run on your CIF. These basic checks will be run on all CIFs submitted for publication in IUCr journals (Acta Crystallographica, Journal of Applied Crystallography, Journal of Synchrotron Radiation); however, if you intend to submit to Acta Crystallographica Section C or E or IUCrData, you should make sure that full publication checks are run on the final version of your CIF prior to submission.

Publication of your CIF in other journals
Please refer to the Notes for Authors of the relevant journal for any special instructions relating to CIF submission.

劳烦大神帮我看下,这个要怎么处理
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DJ_Tokyo

新虫 (知名作家)

引用回帖:
3楼: Originally posted by 2008xian at 2017-08-31 14:22:28
谢谢...

请回帖评分,谢谢!
4楼2017-08-31 21:13:05
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DJ_Tokyo

新虫 (知名作家)

【答案】应助回帖

如图所示,蓝色圈圈中,

你勾选了上面的就将cif和fcf都上传(fcf中包含了structure factor)

你勾选了下面的则只需要上传cif
CHECKCIF时,上传CIF文件后,又要求传structure factor flie
1.png

2楼2017-08-31 12:16:36
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2008xian

新虫 (小有名气)

引用回帖:
2楼: Originally posted by DJ_Tokyo at 2017-08-31 12:16:36
如图所示,蓝色圈圈中,

你勾选了上面的就将cif和fcf都上传(fcf中包含了structure factor)

你勾选了下面的则只需要上传cif

1.png
...

谢谢
3楼2017-08-31 14:22:28
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senli

新虫 (初入文坛)

【答案】应助回帖

楼主在吗?我现在也遇到一些问题,需要求助一下楼主PLAT141_ALERT_4_C s.u. on a - Axis Small or Missing ..............    0.00000 Ang.  
PLAT142_ALERT_4_C s.u. on b - Axis Small or Missing ..............    0.00000 Ang.  
PLAT143_ALERT_4_C s.u. on c - Axis Small or Missing ..............    0.00000 Ang.
5楼2019-11-11 11:04:44
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