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[交流] 居群遗传分析软件GenAlEx教程：GenAlEx 6.5 Tutorials（1-6）-Free已有9人参与

居群遗传分析软件GenAlEx 6.5 Tutorials（1-6）& A Comprehensive Guide to GENALEX6.4(2012)

文件可以从原网站
http://biology.anu.edu.au/GenAlEx/Tutorials.html
下载，也可以从本帖附件下载。

An Overview of Topics

We are pleased to offer a series of self-paced tutorials on population genetic analysis that employ hand calculations and exercises within GenAlEx. These are drawn in part from the graduate workshops that we have offered (jointly and independently), around the world. Click the links below to download tutorials 1 to 6 which have now been revised to bring them up to date with the new features of GenAlEx 6.5.

Tutorial 1 (zip 6.9 mb)
An Introduction to Frequency-Based Population Genetic Analysis: scoring genetic markers, Allele Frequency, Heterozygosity, F-statistics, Nei Genetic Distance, Shannon Diversity Indices and Chi-square tests for Hardy-Weinberg Equilibrium

Tutorial 2 (zip 1.3 mb)
Genetic Distance and AMOVA: Haploid, Codominant and Binary Genetic Distance,AMOVA and F-statistics

Tutorial 3 (zip 4.5 mb)
Spatial Genetic Analysis: Principal Coordinate Analysis (PCoA), Mantel Tests for Matrix Correspondence and Spatial Autocorrelation Analysis

Tutorial 4 (zip 2.6 mb)
Advanced Frequency-Based Analysis: DNA Profile Probability, Probability of Identity, Probability of Exclusion, Population Assignment and Pairwise Relatedness

Tutorial 5 (zip 2 mb)
Advanced Features Including Data Import and Export: Working with DNA sequences, importing and processing raw genotypic data, exporting data from GenAlEx to other software. The Stats menu and how to customise the GenAlEx menu are also covered briefly.

Tutorial 6 (zip 1 mb)
TwoGener: Male gametic inference, male gametic distances, gametic AMOVA

Coming soon - New tutorials outlining some of the new features in GenAlEx 6.5

Tutorial 7:
New estimators of population genetic structure: G’ST, G’’ST and Jost’s Dest, and standardized F’ST via AMOVA

Tutorial 8:
Pairwise Linkage Disequilibrium: estimation of D, D’, r, and r2 for biallelic markers[ Last edited by 凌波丽 on 2013-7-19 at 11:30 ]

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